tcrGraph/NEWS at main · BenaroyaResearch/tcrGraph · GitHub

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tcrGraph v0.2.1 (Release date: 2020-06-22)
==============

Changes:

* Added legend show/hide  and mixed/numeric sort arguments to `makeCircos()`
* Removed requirement that arc color annotation has to be one of segment track annotations

tcrGraph v0.2.0 (Release date: 2020-06-15)
==============

Changes:

* Added `makeCircos()` function to facilitate circos plotting

tcrGraph v0.1.5 (Release date: 2020-03-13)
==============

Changes:

* Fixed minor bug introduced by a change in tidyselect's order of operations

tcrGraph v0.1.4 (Release date: 2019-09-26)
==============

Changes:

* IMPORTANT UPDATE: Changed the way that `getClonesFromTcrGraph()` functions by default. Subgraphs/clones with more than `maxA/B/C/D` chains are now pruned by default to represent the most abundant clone with the max allowed chains. Please consult the documentation for more information.
* Added support for multi-point chain matching when generating a tcrGraph from data
* Added ability to return a tcrGraph object from `getClonesFromTcrGraph()`
* Added automated unit tests

tcrGraph v0.1.3 (Release date: 2019-08-27)
==============

Changes:

* Added visNetwork plotting function `makeVisNetwork()`

tcrGraph v0.1.2.2 (Release date: 2019-07-29)
==============

Changes:

* Added event logging with Research DB APIs

tcrGraph v0.1.2.1 (Release date: 2019-07-26)
==============

Changes:

* Minor update to tcrGraphToIgraph(), to attach cleaner and more compelte edge metadata to igraph object

tcrGraph v0.1.2 (Release date: 2019-07-24)
==============

Changes:

* Increased the data stored in the nodes data frame of a tcrGraph object for easier access
* Implemented as.data.frame method for tcrGraph class

tcrGraph v0.1.1 (Release date: 2019-07-17)
==============

Changes:

* Initial release, implementing basic TCR graph functionality. Highlights include:
  * tcrGraph S3 class and associated methods, including a simple plot() implementation
  * makeTcrGraph() utility function
  * getClonesFromTcrGraph() analysis function