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Changelog

All notable changes to this project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

12.13.1 2026-02-06

Changed

  • Management command remove_user_groups now allows reassigning of select permissions from this group directly.

12.13.0 2026-02-04

Added

  • Added legacy management commands cog_load_accessions and reset_user.
  • Added permission management commands export_user_permissions, import_user_permissions, remove_user_permissions and remove_user_groups.

Changed

  • Bumped django from 2.2.27 to 3.2.25.
  • Bumped django-polymorphic from 2.1.2 to 3.1.0.

12.12.1 2023-06-02

Changed

  • The tasks task_get_sequencing_faster and task_get_pag_v2 now include the anonymous_sample_id in the output BiosampleArtifact fields.

12.12.0 2023-05-30

Added

  • Tests for add biosample and addempty biosample behaviour when anonymous_sample_id is provided as "", or None.
  • Tests for add library when biosamples are force created.

Changed

  • addempty biosample no longer automatically generates an anonymous_sample_id if one is not provided by a user.

Fixed

  • add biosample no longer allows reset of anonymous_sample_id by providing an empty string in partial mode.

12.11.0 2023-05-25

Added

  • The anonymous_sample_id field, on the BiosampleArtifact model.
  • Support for supplying the anonymous_sample_id to both add biosample and addempty biosample endpoints.
  • Permissions can_add_anonymous_sample_id and can_change_anonymous_sample_id to control who can create their own ids, or change a pre-existing id (the latter should rarely be handed out, ideally never).
  • Automatic generation of the anonymous_sample_id from zana if the id is not supplied by a user.
  • Form validation of the anonymous_sample_id checking for prefix-postfix structure separated by a hyphen, acceptable prefixes, required postfix length, and alphanumeric characters only.
  • Tests of both add biosample endpoint and addempty biosample endpoint functionality, in regards to the anonymous_sample_id.
  • Updated settings.py.example with configuration options for this id.

12.10.0 2023-04-25

Added

  • list_institutes and list_institutes_2 management commands for displaying institute opt in/out information.

Changed

  • list_users management command to display more user role information.

12.9.9 2022-03-07

Fixed

  • After two years of solid development, 1300 commits, 33 million API requests and over 2.5 million sequences, it's probably about time to give this thing a version number and CHANGELOG.
  • To whom it may concern, take care of this application. She might have saved lives.
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