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CollectionsRepository.test.ts
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2182 lines (1884 loc) · 90.2 KB
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import { CollectionsRepository } from '../../../src/collections/infra/repositories/CollectionsRepository'
import { TestConstants } from '../../testHelpers/TestConstants'
import {
CollectionDTO,
CollectionItemType,
CollectionPreview,
CollectionSearchCriteria,
CreatedDatasetIdentifiers,
DatasetPreview,
FilePreview,
ReadError,
WriteError,
createDataset,
getCollection,
createCollection,
getDatasetFiles,
restrictFile,
deleteFile,
linkDataset
} from '../../../src'
import { ApiConfig } from '../../../src'
import { DataverseApiAuthMechanism } from '../../../src/core/infra/repositories/ApiConfig'
import {
createCollectionDTO,
createCollectionViaApi,
deleteCollectionViaApi,
publishCollectionViaApi,
ROOT_COLLECTION_ALIAS
} from '../../testHelpers/collections/collectionHelper'
import { CollectionPayload } from '../../../src/collections/infra/repositories/transformers/CollectionPayload'
import { updateFileTabularTags, uploadFileViaApi } from '../../testHelpers/files/filesHelper'
import {
deletePublishedDatasetViaApi,
deleteUnpublishedDatasetViaApi,
publishDatasetViaApi,
waitForNoLocks
} from '../../testHelpers/datasets/datasetHelper'
import { PublicationStatus } from '../../../src/core/domain/models/PublicationStatus'
import { CollectionType } from '../../../src/collections/domain/models/CollectionType'
import {
OrderType,
SortType
} from '../../../src/collections/domain/models/CollectionSearchCriteria'
import { ROOT_COLLECTION_ID } from '../../../src/collections/domain/models/Collection'
import {
createCollectionCustomFeaturedItemViaApi,
createCollectionDvObjectFeaturedItemViaApi,
createImageFile,
deleteCollectionFeaturedItemsViaApi,
deleteCollectionFeaturedItemViaApi
} from '../../testHelpers/collections/collectionFeaturedItemsHelper'
import { createApiTokenViaApi } from '../../testHelpers/users/apiTokenHelper'
import {
CustomFeaturedItem,
FeaturedItemType
} from '../../../src/collections/domain/models/FeaturedItem'
import {
DvObjectFeaturedItemDTO,
FeaturedItemsDTO
} from '../../../src/collections/domain/dtos/FeaturedItemsDTO'
describe('CollectionsRepository', () => {
const testCollectionAlias = 'collectionsRepositoryTestCollection'
const sut: CollectionsRepository = new CollectionsRepository()
let testCollectionId: number
// TODO: uncomment this test when https://github.com/IQSS/dataverse/issues/12027 is fixed
// const currentYear = new Date().getFullYear()
beforeAll(async () => {
// create builtin user and pass API key to APiConfig
ApiConfig.init(
TestConstants.TEST_API_URL,
DataverseApiAuthMechanism.API_KEY,
process.env.TEST_API_KEY
)
await createCollectionViaApi(testCollectionAlias).then(
(collectionPayload: CollectionPayload) => (testCollectionId = collectionPayload.id)
)
})
afterAll(async () => {
ApiConfig.init(
TestConstants.TEST_API_URL,
DataverseApiAuthMechanism.API_KEY,
process.env.TEST_API_KEY
)
await deleteCollectionViaApi(testCollectionAlias)
})
describe('getCollection', () => {
describe('by default `root` Id', () => {
test('should return the root collection of the Dataverse installation if no parameter is passed AS `root`', async () => {
const actual = await sut.getCollection()
expect(actual.alias).toBe(ROOT_COLLECTION_ALIAS)
expect(actual.id).toBe(1)
expect(actual.name).toBe('Root')
expect(actual.alias).toBe('root')
expect(actual.isReleased).toBe(true)
expect(actual.affiliation).toBe(undefined)
expect(actual.description).toBe('The root dataverse.')
expect(actual.inputLevels).toBe(undefined)
expect(actual.type).toBe(CollectionType.UNCATEGORIZED)
expect(actual.contacts).toEqual([{ email: 'root@mailinator.com', displayOrder: 0 }])
expect(actual.isMetadataBlockRoot).toBe(true)
expect(actual.isFacetRoot).toBe(true)
})
test('should return isReleased is true for root collection', async () => {
const actual = await sut.getCollection()
expect(actual.alias).toBe(ROOT_COLLECTION_ALIAS)
expect(actual.isReleased).toBe(true)
})
})
describe('by string alias', () => {
test('should return collection when it exists filtering by id AS (alias)', async () => {
const actual = await sut.getCollection(testCollectionAlias)
expect(actual.alias).toBe(testCollectionAlias)
})
test('should return isReleased is false for unpublished collection', async () => {
const actual = await sut.getCollection(testCollectionAlias)
expect(actual.alias).toBe(testCollectionAlias)
expect(actual.isReleased).toBe(false)
})
test('should return error when collection does not exist', async () => {
const expectedError = new ReadError(
`[404] Can't find dataverse with identifier='${TestConstants.TEST_DUMMY_COLLECTION_ALIAS}'`
)
await expect(sut.getCollection(TestConstants.TEST_DUMMY_COLLECTION_ALIAS)).rejects.toThrow(
expectedError
)
})
})
describe('by numeric id', () => {
test('should return collection when it exists filtering by id AS (id)', async () => {
const actual = await sut.getCollection(testCollectionId)
expect(actual.id).toBe(testCollectionId)
})
test('should return error when collection does not exist', async () => {
const expectedError = new ReadError(
`[404] Can't find dataverse with identifier='${TestConstants.TEST_DUMMY_COLLECTION_ID}'`
)
await expect(sut.getCollection(TestConstants.TEST_DUMMY_COLLECTION_ID)).rejects.toThrow(
expectedError
)
})
})
test('should return childCount correctly', async () => {
const parentCollectionAlias = 'childCountTestCollection'
const childCollectionAlias = 'childCountTestChildCollection'
await createCollectionViaApi(parentCollectionAlias, ROOT_COLLECTION_ALIAS)
await createCollectionViaApi(childCollectionAlias, parentCollectionAlias)
const { numericId: childDatasetNumericId } = await createDataset.execute(
TestConstants.TEST_NEW_DATASET_DTO,
parentCollectionAlias
)
const actual = await sut.getCollection(parentCollectionAlias)
expect(actual.childCount).toBe(2)
await deleteCollectionViaApi(childCollectionAlias)
const actualAfterDeletion = await sut.getCollection(parentCollectionAlias)
expect(actualAfterDeletion.childCount).toBe(1)
await deleteUnpublishedDatasetViaApi(childDatasetNumericId)
const actualAfterDatasetDeletion = await sut.getCollection(parentCollectionAlias)
expect(actualAfterDatasetDeletion.childCount).toBe(0)
await deleteCollectionViaApi(parentCollectionAlias)
})
})
describe('publishCollection', () => {
const testPublishCollectionAlias = 'publishCollection-test'
afterAll(async () => {
await deleteCollectionViaApi(testPublishCollectionAlias)
})
test('should publish a collection', async () => {
const newCollectionDTO = createCollectionDTO(testPublishCollectionAlias)
const actualId = await sut.createCollection(newCollectionDTO)
await sut.publishCollection(actualId)
const createdCollection = await sut.getCollection(actualId)
expect(createdCollection.isReleased).toBe(true)
expect(createdCollection.name).toBe(newCollectionDTO.name)
})
})
describe('createCollection', () => {
const testCreateCollectionAlias1 = 'createCollection-test-1'
const testCreateCollectionAlias2 = 'createCollection-test-2'
const testCreateCollectionAlias3 = 'createCollection-test-3'
const testCreateCollectionAlias4 = 'createCollection-test-4'
const testCreateCollectionAlias5 = 'createCollection-test-5'
afterAll(async () => {
await deleteCollectionViaApi(testCreateCollectionAlias1)
await deleteCollectionViaApi(testCreateCollectionAlias2)
await deleteCollectionViaApi(testCreateCollectionAlias3)
await deleteCollectionViaApi(testCreateCollectionAlias4)
await deleteCollectionViaApi(testCreateCollectionAlias5)
})
test('should create collection in root when no parent collection is set', async () => {
const newCollectionDTO = createCollectionDTO(testCreateCollectionAlias1)
const actualId = await sut.createCollection(newCollectionDTO)
expect(typeof actualId).toBe('number')
const createdCollection = await sut.getCollection(actualId)
expect(createdCollection.id).toBe(actualId)
expect(createdCollection.alias).toBe(newCollectionDTO.alias)
expect(createdCollection.name).toBe(newCollectionDTO.name)
expect(createdCollection.affiliation).toBe(newCollectionDTO.affiliation)
expect(createdCollection.isPartOf.type).toBe('DATAVERSE')
expect(createdCollection.isPartOf.displayName).toBe('Root')
expect(createdCollection.isPartOf.identifier).toBe('root')
expect(createdCollection.isPartOf.isReleased).toBe(true)
expect(createdCollection.inputLevels?.length).toBe(1)
const inputLevel = createdCollection.inputLevels?.[0]
expect(inputLevel?.datasetFieldName).toBe('geographicCoverage')
expect(inputLevel?.include).toBe(true)
expect(inputLevel?.required).toBe(true)
})
test('should create collection in parent collection when parent collection is set', async () => {
const actualId = await sut.createCollection(
createCollectionDTO(testCreateCollectionAlias2),
testCollectionId
)
expect(typeof actualId).toBe('number')
const collectionCreated = await sut.getCollection(actualId)
expect(collectionCreated.isMetadataBlockRoot).toBe(true)
expect(collectionCreated.isFacetRoot).toBe(true)
})
test('should create a collection to inherit metadata blocks from parent collection', async () => {
const childCollectionDTO = createCollectionDTO(testCreateCollectionAlias3)
childCollectionDTO.inheritMetadataBlocksFromParent = true
const childCollectionId = await sut.createCollection(childCollectionDTO)
const childCollection = await sut.getCollection(childCollectionId)
expect(childCollection.isMetadataBlockRoot).toBe(false)
expect(childCollection.isFacetRoot).toBe(true)
})
test('should create a collection to inherit facets from parent collection', async () => {
const childCollectionDTO = createCollectionDTO(testCreateCollectionAlias4)
childCollectionDTO.inheritFacetsFromParent = true
const childCollectionId = await sut.createCollection(childCollectionDTO)
const childCollection = await sut.getCollection(childCollectionId)
expect(childCollection.isMetadataBlockRoot).toBe(true)
expect(childCollection.isFacetRoot).toBe(false)
})
test('should create a collection to inherit metadata blocks and facets from parent collection', async () => {
const childCollectionDTO = createCollectionDTO(testCreateCollectionAlias5)
childCollectionDTO.inheritMetadataBlocksFromParent = true
childCollectionDTO.inheritFacetsFromParent = true
const childCollectionId = await sut.createCollection(childCollectionDTO)
const childCollection = await sut.getCollection(childCollectionId)
expect(childCollection.isMetadataBlockRoot).toBe(false)
expect(childCollection.isFacetRoot).toBe(false)
})
test('should return error when parent collection does not exist', async () => {
const expectedError = new WriteError(
`[404] Can't find dataverse with identifier='${TestConstants.TEST_DUMMY_COLLECTION_ID}'`
)
const testCreateCollectionAlias3 = 'createCollection-test-3'
await expect(
sut.createCollection(
createCollectionDTO(testCreateCollectionAlias3),
TestConstants.TEST_DUMMY_COLLECTION_ID
)
).rejects.toThrow(expectedError)
})
})
describe('deleteCollection', () => {
test('should delete collection successfully', async () => {
const collectionAlias = 'deleteCollection-test'
const collectionDTO = createCollectionDTO(collectionAlias)
await sut.createCollection(collectionDTO)
const createdCollection = await sut.getCollection(collectionAlias)
expect(createdCollection.alias).toBe(collectionAlias)
const deleteResult = await sut.deleteCollection(collectionAlias)
const expectedError = new ReadError(
`[404] Can't find dataverse with identifier='${collectionAlias}'`
)
expect(deleteResult).toBeUndefined()
await expect(sut.getCollection(collectionAlias)).rejects.toThrow(expectedError)
})
test('should return error when collection does not exist', async () => {
const expectedError = new WriteError(
`[404] Can't find dataverse with identifier='${TestConstants.TEST_DUMMY_COLLECTION_ID}'`
)
await expect(sut.deleteCollection(TestConstants.TEST_DUMMY_COLLECTION_ID)).rejects.toThrow(
expectedError
)
})
})
describe('getCollectionFacets', () => {
test('should return collection facets given a valid collection alias', async () => {
const actual = await sut.getCollectionFacets(testCollectionAlias)
expect(actual.length).toBe(4)
expect(actual[0].name).toBe('authorName')
expect(actual[0].displayName).toBe('Author Name')
expect(actual[0].id).not.toBe(undefined)
})
test('should return error when collection does not exist', async () => {
const expectedError = new ReadError(
`[404] Can't find dataverse with identifier='${TestConstants.TEST_DUMMY_COLLECTION_ALIAS}'`
)
await expect(
sut.getCollectionFacets(TestConstants.TEST_DUMMY_COLLECTION_ALIAS)
).rejects.toThrow(expectedError)
})
})
describe('getCollectionUserPermissions', () => {
test('should return user permissions', async () => {
const actual = await sut.getCollectionUserPermissions('root')
expect(actual.canAddDataset).toBe(true)
expect(actual.canAddCollection).toBe(true)
expect(actual.canDeleteCollection).toBe(true)
expect(actual.canEditCollection).toBe(true)
expect(actual.canManageCollectionPermissions).toBe(true)
expect(actual.canPublishCollection).toBe(true)
expect(actual.canViewUnpublishedCollection).toBe(true)
})
test('should return error when collection does not exist', async () => {
const nonExistentCollectionAlias = 'nonExistentCollection'
const expectedError = new ReadError(
`[404] Can't find dataverse with identifier='${nonExistentCollectionAlias}'`
)
await expect(sut.getCollectionUserPermissions(nonExistentCollectionAlias)).rejects.toThrow(
expectedError
)
})
})
describe('getCollectionItems', () => {
let testDatasetIds: CreatedDatasetIdentifiers
const testTextFile1Name = 'test-file-1.txt'
const testSubCollectionAlias = 'collectionsRepositoryTestSubCollection'
const testCollectionItemsAlias = 'collectionsRepositoryTestCollectionItems'
beforeAll(async () => {
await createCollectionViaApi(testCollectionItemsAlias, ROOT_COLLECTION_ALIAS).catch(() => {
throw new Error(
`Tests beforeAll(): Error while creating collection ${testCollectionItemsAlias}`
)
})
await createCollectionViaApi(testSubCollectionAlias, testCollectionItemsAlias).catch(() => {
throw new Error(
`Tests beforeAll(): Error while creating subcollection ${testSubCollectionAlias}`
)
})
try {
testDatasetIds = await createDataset.execute(
TestConstants.TEST_NEW_DATASET_DTO,
testSubCollectionAlias
)
} catch (error) {
throw new Error('Tests beforeAll(): Error while creating test dataset')
}
await uploadFileViaApi(testDatasetIds.numericId, testTextFile1Name).catch(() => {
throw new Error(`Tests beforeAll(): Error while uploading file ${testTextFile1Name}`)
})
})
afterAll(async () => {
try {
await deleteUnpublishedDatasetViaApi(testDatasetIds.numericId)
} catch (error) {
throw new Error(
`Tests afterAll(): Error while deleting test dataset ${testDatasetIds.numericId}`
)
}
try {
await deleteCollectionViaApi(testSubCollectionAlias)
} catch (error) {
throw new Error(
`Tests afterAll(): Error while deleting subcollection ${testSubCollectionAlias}`
)
}
})
test('should return collection items given a valid collection alias', async () => {
// Give enough time to Solr for indexing
await new Promise((resolve) => setTimeout(resolve, 5000))
let actual = await sut.getCollectionItems(testCollectionItemsAlias)
const actualFilePreview = actual.items[1] as FilePreview
const actualDatasetPreview = actual.items[0] as DatasetPreview
const actualCollectionPreview = actual.items[2] as CollectionPreview
const expectedFileMd5 = '68b22040025784da775f55cfcb6dee2e'
// TODO: uncomment this test when https://github.com/IQSS/dataverse/issues/12027 is fixed
// const expectedDatasetCitationFragment = `Admin, Dataverse; Owner, Dataverse, ${currentYear}, "Dataset created using the createDataset use case"`
const expectedDatasetDescription = 'Dataset created using the createDataset use case'
const expectedFileName = 'test-file-1.txt'
const expectedCollectionsName = 'Scientific Research'
//prettier-ignore
const expectedFacetsAll = [
{
name: 'dvCategory', friendlyName: 'Dataverse Category', labels: [{ name: 'Laboratory', count: 1 }]
},
{
name: 'publicationStatus', friendlyName: 'Publication Status', labels: [{ name: 'Unpublished', count: 3 },{ name: 'Draft', count: 2 }]
},
{
name: 'authorName_ss', friendlyName: 'Author Name', labels: [{ name: 'Admin, Dataverse', count: 1 },{ name: 'Owner, Dataverse', count: 1 }]
},
{
name: 'subject_ss', friendlyName: 'Subject', labels: [{ name: 'Medicine, Health and Life Sciences', count: 1 }]
},
{
name: 'fileTypeGroupFacet', friendlyName: 'File Type', labels: [{ name: 'Text', count: 1 }]
},
{
name: 'fileAccess', friendlyName: 'Access', labels: [{ name: 'Public', count: 1 }]
}
]
//prettier-ignore
const expectedFacetsFromCollectionOnly = [
{
name: 'dvCategory', friendlyName: 'Dataverse Category', labels: [{ name: 'Laboratory', count: 1 }]
},
{
name: 'publicationStatus', friendlyName: 'Publication Status', labels: [{ name: 'Unpublished', count: 1 }]
}
]
//prettier-ignore
const expectedFacetsFromDatasetOnly = [
{
name: 'publicationStatus', friendlyName: 'Publication Status', labels: [{ name: 'Draft', count: 1 },{ name: 'Unpublished', count: 1 }]
},
{
name: 'authorName_ss', friendlyName: 'Author Name', labels: [{ name: 'Admin, Dataverse', count: 1 },{ name: 'Owner, Dataverse', count: 1 }]
},
{
name: 'subject_ss', friendlyName: 'Subject', labels: [{ name: 'Medicine, Health and Life Sciences', count: 1 }]
}
]
//prettier-ignore
const expectedFacetsFromFileOnly = [
{
name: 'publicationStatus', friendlyName: 'Publication Status', labels: [{ name: 'Draft', count: 1 },{ name: 'Unpublished', count: 1 }]
},
{ name: 'fileTypeGroupFacet', friendlyName: 'File Type', labels: [{ name: 'Text', count: 1 }] },
{ name: 'fileAccess', friendlyName: 'Access', labels: [{ name: 'Public', count: 1 }] }
]
//prettier-ignore
const expectedFacetsFromCollectionAndFile = [
{
name: 'dvCategory', friendlyName: 'Dataverse Category', labels: [{ name: 'Laboratory', count: 1 }]
},
{
name: 'publicationStatus', friendlyName: 'Publication Status', labels: [{ name: 'Unpublished', count: 2 },{ name: 'Draft', count: 1 }]
},
{ name: 'fileTypeGroupFacet', friendlyName: 'File Type', labels: [{ name: 'Text', count: 1 }] },
{ name: 'fileAccess', friendlyName: 'Access', labels: [{ name: 'Public', count: 1 }] }
]
expect(actualFilePreview.checksum?.type).toBe('MD5')
expect(actualFilePreview.checksum?.value).toBe(expectedFileMd5)
// TODO: uncomment this test when https://github.com/IQSS/dataverse/issues/12027 is fixed
// expect(actualFilePreview.datasetCitation).toContain(expectedDatasetCitationFragment)
expect(actualFilePreview.datasetId).toBe(testDatasetIds.numericId)
expect(actualFilePreview.datasetName).toBe(expectedDatasetDescription)
expect(actualFilePreview.datasetPersistentId).toBe(testDatasetIds.persistentId)
expect(actualFilePreview.description).toBe('')
expect(actualFilePreview.fileContentType).toBe('text/plain')
expect(actualFilePreview.fileId).not.toBeUndefined()
expect(actualFilePreview.fileType).toBe('Plain Text')
expect(actualFilePreview.md5).toBe(expectedFileMd5)
expect(actualFilePreview.name).toBe(expectedFileName)
expect(actualFilePreview.publicationStatuses.length).toBe(2)
expect(actualFilePreview.publicationStatuses).toContain(PublicationStatus.Unpublished)
expect(actualFilePreview.publicationStatuses).toContain(PublicationStatus.Draft)
expect(actualFilePreview.sizeInBytes).toBe(12)
expect(actualFilePreview.url).not.toBeUndefined()
expect(actualFilePreview.releaseOrCreateDate).not.toBeUndefined()
expect(actualFilePreview.type).toBe(CollectionItemType.FILE)
expect(actualFilePreview.restricted).toBe(false)
expect(actualFilePreview.canDownloadFile).toBe(true)
expect(actualDatasetPreview.title).toBe(expectedDatasetDescription)
// TODO: uncomment this test when https://github.com/IQSS/dataverse/issues/12027 is fixed
// expect(actualDatasetPreview.citation).toContain(expectedDatasetCitationFragment)
expect(actualDatasetPreview.description).toBe('This is the description of the dataset.')
expect(actualDatasetPreview.persistentId).not.toBeUndefined()
expect(actualDatasetPreview.persistentId).not.toBeUndefined()
expect(actualDatasetPreview.publicationStatuses).toContain(PublicationStatus.Unpublished)
expect(actualFilePreview.publicationStatuses).toContain(PublicationStatus.Draft)
expect(actualDatasetPreview.versionId).not.toBeUndefined()
expect(actualDatasetPreview.versionInfo.createTime).not.toBeUndefined()
expect(actualDatasetPreview.versionInfo.lastUpdateTime).not.toBeUndefined()
expect(actualDatasetPreview.versionInfo.majorNumber).toBeUndefined()
expect(actualDatasetPreview.versionInfo.minorNumber).toBeUndefined()
expect(actualDatasetPreview.versionInfo.state).toBe('DRAFT')
expect(actualDatasetPreview.parentCollectionAlias).toBe(
'collectionsRepositoryTestSubCollection'
)
expect(actualDatasetPreview.parentCollectionName).toBe(expectedCollectionsName)
expect(actualDatasetPreview.type).toBe(CollectionItemType.DATASET)
expect(actualCollectionPreview.name).toBe(expectedCollectionsName)
expect(actualCollectionPreview.alias).toBe(testSubCollectionAlias)
expect(actualCollectionPreview.description).toBe('We do all the science.')
expect(actualCollectionPreview.imageUrl).toBe(undefined)
expect(actualCollectionPreview.parentAlias).toBe(testCollectionItemsAlias)
expect(actualCollectionPreview.parentName).toBe(expectedCollectionsName)
expect(actualCollectionPreview.publicationStatuses).toContain(PublicationStatus.Unpublished)
expect(actualCollectionPreview.releaseOrCreateDate).not.toBeUndefined()
expect(actualCollectionPreview.affiliation).toBe('Scientific Research University')
expect(actualCollectionPreview.parentAlias).toBe('collectionsRepositoryTestCollectionItems')
expect(actualCollectionPreview.parentName).toBe(expectedCollectionsName)
expect(actualCollectionPreview.type).toBe(CollectionItemType.COLLECTION)
expect(actual.totalItemCount).toBe(3)
expect(actual.facets).toEqual(expectedFacetsAll)
// Test limit and offset
actual = await sut.getCollectionItems(testCollectionItemsAlias, 1, 1)
expect((actual.items[0] as FilePreview).name).toBe(expectedFileName)
expect(actual.items.length).toBe(1)
expect(actual.totalItemCount).toBe(3)
// Test search text
const collectionSearchCriteriaForFile = new CollectionSearchCriteria().withSearchText(
'test-fi'
)
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaForFile
)
expect(actual.totalItemCount).toBe(1)
expect((actual.items[0] as FilePreview).name).toBe(expectedFileName)
const collectionSearchCriteriaForDataset = new CollectionSearchCriteria().withSearchText(
'Dataset created using'
)
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaForDataset
)
expect(actual.totalItemCount).toBe(1)
expect((actual.items[0] as DatasetPreview).title).toBe(expectedDatasetDescription)
const collectionSearchCriteriaForDatasetAndCollection =
new CollectionSearchCriteria().withSearchText('the')
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaForDatasetAndCollection
)
expect(actual.totalItemCount).toBe(2)
expect((actual.items[0] as DatasetPreview).title).toBe(expectedDatasetDescription)
expect((actual.items[1] as CollectionPreview).name).toBe(expectedCollectionsName)
// Test search text, limit and offset
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
1,
1,
collectionSearchCriteriaForDatasetAndCollection
)
expect(actual.items.length).toBe(1)
expect(actual.totalItemCount).toBe(2)
expect((actual.items[0] as CollectionPreview).name).toBe(expectedCollectionsName)
// Test type collection
const collectionSearchCriteriaForCollectionType =
new CollectionSearchCriteria().withItemTypes([CollectionItemType.COLLECTION])
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaForCollectionType
)
expect(actual.items.length).toBe(1)
expect(actual.totalItemCount).toBe(1)
expect((actual.items[0] as CollectionPreview).name).toBe(expectedCollectionsName)
expect(actual.facets).toEqual(expectedFacetsFromCollectionOnly)
// Test type dataset
const collectionSearchCriteriaForDatasetType = new CollectionSearchCriteria().withItemTypes([
CollectionItemType.DATASET
])
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaForDatasetType
)
expect(actual.items.length).toBe(1)
expect(actual.totalItemCount).toBe(1)
expect((actual.items[0] as DatasetPreview).title).toBe(expectedDatasetDescription)
expect(actual.facets).toEqual(expectedFacetsFromDatasetOnly)
// Test type file
const collectionSearchCriteriaForFileType = new CollectionSearchCriteria().withItemTypes([
CollectionItemType.FILE
])
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaForFileType
)
expect(actual.items.length).toBe(1)
expect(actual.totalItemCount).toBe(1)
expect((actual.items[0] as FilePreview).name).toBe(expectedFileName)
expect(actual.facets).toEqual(expectedFacetsFromFileOnly)
// Test multiple types
const collectionSearchCriteriaForMultiTypes = new CollectionSearchCriteria().withItemTypes([
CollectionItemType.FILE,
CollectionItemType.COLLECTION
])
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaForMultiTypes
)
expect(actual.items.length).toBe(2)
expect(actual.totalItemCount).toBe(2)
expect((actual.items[0] as FilePreview).name).toBe(expectedFileName)
expect((actual.items[1] as CollectionPreview).name).toBe(expectedCollectionsName)
expect(actual.facets).toEqual(expectedFacetsFromCollectionAndFile)
// Test Sort by name ascending
const collectionSearchCriteriaNameAscending = new CollectionSearchCriteria()
.withSort(SortType.NAME)
.withOrder(OrderType.ASC)
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaNameAscending
)
expect(actual.items.length).toBe(3)
expect(actual.totalItemCount).toBe(3)
expect((actual.items[0] as DatasetPreview).type).toBe(CollectionItemType.DATASET)
expect((actual.items[1] as CollectionPreview).type).toBe(CollectionItemType.COLLECTION)
expect((actual.items[2] as FilePreview).type).toBe(CollectionItemType.FILE)
// Test Sort by name descending
const collectionSearchCriteriaNameDescending = new CollectionSearchCriteria()
.withSort(SortType.NAME)
.withOrder(OrderType.DESC)
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaNameDescending
)
expect(actual.items.length).toBe(3)
expect(actual.totalItemCount).toBe(3)
expect((actual.items[0] as FilePreview).type).toBe(CollectionItemType.FILE)
expect((actual.items[1] as CollectionPreview).type).toBe(CollectionItemType.COLLECTION)
expect((actual.items[2] as DatasetPreview).type).toBe(CollectionItemType.DATASET)
// Test Sort by date ascending
const collectionSearchCriteriaDateAscending = new CollectionSearchCriteria()
.withSort(SortType.DATE)
.withOrder(OrderType.ASC)
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaDateAscending
)
expect(actual.items.length).toBe(3)
expect(actual.totalItemCount).toBe(3)
expect((actual.items[0] as CollectionPreview).type).toBe(CollectionItemType.COLLECTION)
expect((actual.items[1] as DatasetPreview).type).toBe(CollectionItemType.DATASET)
expect((actual.items[2] as FilePreview).type).toBe(CollectionItemType.FILE)
// Test Sort by date descending
const collectionSearchCriteriaDateDescending = new CollectionSearchCriteria()
.withSort(SortType.DATE)
.withOrder(OrderType.DESC)
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaDateDescending
)
expect(actual.items.length).toBe(3)
expect(actual.totalItemCount).toBe(3)
expect((actual.items[0] as DatasetPreview).type).toBe(CollectionItemType.DATASET)
expect((actual.items[1] as FilePreview).type).toBe(CollectionItemType.FILE)
expect((actual.items[2] as CollectionPreview).type).toBe(CollectionItemType.COLLECTION)
// Test with Filter query related to the collection
const collectionSearchCriteriaFilterQueryCollection =
new CollectionSearchCriteria().withFilterQueries(['dvCategory:Laboratory'])
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaFilterQueryCollection
)
expect(actual.items.length).toBe(1)
expect(actual.totalItemCount).toBe(1)
expect((actual.items[0] as CollectionPreview).name).toBe(expectedCollectionsName)
expect(actual.facets).toEqual(expectedFacetsFromCollectionOnly)
// Test with Filter query related to the dataset
const collectionSearchCriteriaFilterQueryDataset =
new CollectionSearchCriteria().withFilterQueries([
'subject_ss:Medicine, Health and Life Sciences'
])
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaFilterQueryDataset
)
expect(actual.items.length).toBe(1)
expect(actual.totalItemCount).toBe(1)
expect((actual.items[0] as DatasetPreview).title).toBe(expectedDatasetDescription)
expect(actual.facets).toEqual(expectedFacetsFromDatasetOnly)
// Test with Filter query related to the file
const collectionSearchCriteriaFilterQuerieCollAndFile =
new CollectionSearchCriteria().withFilterQueries(['fileAccess:Public'])
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
collectionSearchCriteriaFilterQuerieCollAndFile
)
expect(actual.items.length).toBe(1)
expect(actual.totalItemCount).toBe(1)
expect((actual.items[0] as FilePreview).name).toBe(expectedFileName)
expect(actual.facets).toEqual(expectedFacetsFromFileOnly)
// Test with showTypeCounts param in true
actual = await sut.getCollectionItems(
testCollectionItemsAlias,
undefined,
undefined,
undefined,
undefined,
true
)
expect(actual.countPerObjectType?.collections).toBe(1)
expect(actual.countPerObjectType?.datasets).toBe(1)
expect(actual.countPerObjectType?.files).toBe(1)
})
test('should return error when collection does not exist', async () => {
const expectedError = new ReadError(
`[400] Could not find dataverse with alias ${TestConstants.TEST_DUMMY_COLLECTION_ALIAS}`
)
await expect(
sut.getCollectionItems(TestConstants.TEST_DUMMY_COLLECTION_ALIAS)
).rejects.toThrow(expectedError)
})
})
describe('getCollectionsForLinking', () => {
const linkingParentCollection = 'collectionsRepositoryLinkingTestParentCollection'
const linkingTargetAlias = 'collectionsRepositoryLinkTarget'
beforeAll(async () => {
await createCollectionViaApi(linkingParentCollection)
await createCollectionViaApi(linkingTargetAlias, linkingParentCollection)
})
afterAll(async () => {
await deleteCollectionViaApi(linkingTargetAlias)
await deleteCollectionViaApi(linkingParentCollection)
})
test('should list collections for linking for a given collection alias', async () => {
const results = await sut.getCollectionsForLinking(
'collection',
linkingParentCollection,
'Scientific',
false
)
expect(Array.isArray(results)).toBe(true)
// Should contain the newly created linking target collection among candidates
const found = results.find((c) => c.alias === linkingTargetAlias)
expect(found).toBeDefined()
expect(found?.id).toBeGreaterThan(0)
expect(found?.displayName).toBe('Scientific Research')
})
test('should list collections for linking for a given dataset persistentId', async () => {
// Create a temporary dataset to query linking candidates
const { persistentId, numericId } = await createDataset.execute(
TestConstants.TEST_NEW_DATASET_DTO,
linkingParentCollection
)
const results = await sut.getCollectionsForLinking(
'dataset',
persistentId,
'Scientific',
false
)
// Cleanup dataset (unpublished)
await deleteUnpublishedDatasetViaApi(numericId)
expect(Array.isArray(results)).toBe(true)
const found = results.find((c) => c.alias === linkingTargetAlias)
expect(found).toBeDefined()
expect(found?.displayName).toBe('Scientific Research')
})
test('should return collections for unlinking when sending alreadyLinked param to true', async () => {
const collectionsForUnlinkingBefore = await sut.getCollectionsForLinking(
'collection',
linkingParentCollection,
'',
true
)
// Link the test collection with the linking target collection
await sut.linkCollection(linkingParentCollection, linkingTargetAlias)
const collectionsForUnlinkingAfter = await sut.getCollectionsForLinking(
'collection',
linkingParentCollection,
'',
true
)
expect(collectionsForUnlinkingBefore.length).toBe(0)
expect(collectionsForUnlinkingAfter.length).toBeGreaterThan(0)
expect(collectionsForUnlinkingAfter[0].alias).toBe(linkingTargetAlias)
expect(collectionsForUnlinkingAfter[0].displayName).toBe('Scientific Research')
})
it('should return error when collection does not exist', async () => {
await expect(
sut.getCollectionsForLinking(
'collection',
TestConstants.TEST_DUMMY_COLLECTION_ALIAS,
'',
false
)
).rejects.toThrow(ReadError)
})
it('should return error when dataset does not exist', async () => {
await expect(
sut.getCollectionsForLinking('dataset', TestConstants.TEST_DUMMY_PERSISTENT_ID, '', false)
).rejects.toThrow(ReadError)
})
})
describe('getCollectionItems for published tabular file', () => {
let testDatasetIds: CreatedDatasetIdentifiers
const testTextFile4Name = 'test-file-4.tab'
const testSubCollectionAlias = 'collectionsRepositoryTestSubCollection'
beforeAll(async () => {
await sut.publishCollection(testCollectionId).catch(() => {
throw new Error(`Tests beforeAll(): Error while publishing collection ${testCollectionId}`)
})
const collectionPayload = await createCollectionViaApi(
testSubCollectionAlias,
testCollectionAlias
).catch(() => {
throw new Error(
`Tests beforeAll(): Error while creating subcollection ${testSubCollectionAlias}`
)
})
await sut.publishCollection(collectionPayload.id).catch(() => {
throw new Error(`Tests beforeAll(): Error while publishing collection ${testCollectionId}`)
})
try {
testDatasetIds = await createDataset.execute(
TestConstants.TEST_NEW_DATASET_DTO,
testSubCollectionAlias
)
} catch (error) {
throw new Error('Tests beforeAll(): Error while creating test dataset')
}
const uploadFileViaApiResult = await uploadFileViaApi(
testDatasetIds.numericId,
testTextFile4Name,
{
categories: ['tabular data']
}
).catch(() => {
throw new Error(`Tests beforeAll(): Error while uploading file ${testTextFile4Name}`)
})
await new Promise((resolve) => setTimeout(resolve, 5000))
await updateFileTabularTags(uploadFileViaApiResult.data.data.files[0].dataFile.id, [
'Survey',
'Genomics'
]).catch(() => {
throw new Error(
`Tests beforeAll(): Error while updating file tabular tags ${uploadFileViaApiResult.data.data.files[0].dataFile.id}`
)
})
await publishDatasetViaApi(testDatasetIds.numericId).catch(() => {
throw new Error(
`Tests beforeAll(): Error while publishing dataset ${testDatasetIds.numericId}`
)
})
})
afterAll(async () => {
try {
await deletePublishedDatasetViaApi(testDatasetIds.persistentId)
} catch (error) {
throw new Error(
`Tests afterAll(): Error while deleting test dataset ${testDatasetIds.persistentId}`
)
}
try {
await deleteCollectionViaApi(testSubCollectionAlias)
} catch (error) {
throw new Error(
`Tests afterAll(): Error while deleting subcollection ${testSubCollectionAlias}`
)
}
})
test('should return collection items given a valid collection alias', async () => {
// Give enough time to Solr for indexing
await new Promise((resolve) => setTimeout(resolve, 5000))
const actual = await sut.getCollectionItems(testCollectionAlias)
const actualFilePreview = actual.items[1] as FilePreview
const actualDatasetPreview = actual.items[0] as DatasetPreview
const actualCollectionPreview = actual.items[2] as CollectionPreview
const expectedFileMd5 = '77c7f03a7d7772907b43f0b322cef723'
// TODO: uncomment this test when https://github.com/IQSS/dataverse/issues/12027 is fixed
// const expectedDatasetCitationFragment = `Admin, Dataverse; Owner, Dataverse, ${currentYear}, "Dataset created using the createDataset use case`
const expectedDatasetDescription = 'Dataset created using the createDataset use case'
const expectedFileName = 'test-file-4.tsv'