Merge pull request #9068 from bencomp/https-in-docs

Update HTTP URL to HTTPS URL

Author: landreev

README.md

@@ -1,7 +1,7 @@
 Dataverse®  
 ===============
 
-Dataverse is an [open source][] software platform for sharing, finding, citing, and preserving research data (developed by the [Dataverse team](https://dataverse.org/about) at the [Institute for Quantitative Social Science](http://iq.harvard.edu/) and the [Dataverse community][]).
+Dataverse is an [open source][] software platform for sharing, finding, citing, and preserving research data (developed by the [Data Science and Products team](https://www.iq.harvard.edu/people/people/data-science-products) at the [Institute for Quantitative Social Science](https://iq.harvard.edu/) and the [Dataverse community][]).
 
 [dataverse.org][] is our home on the web and shows a map of Dataverse installations around the world, a list of [features][], [integrations][] that have been made possible through [REST APIs][], our development [roadmap][], and more.
 
@@ -26,15 +26,15 @@ Dataverse is a trademark of President and Fellows of Harvard College and is regi
 [dataverse.org]: https://dataverse.org
 [demo.dataverse.org]: https://demo.dataverse.org
 [Dataverse community]: https://dataverse.org/developers
-[Installation Guide]: http://guides.dataverse.org/en/latest/installation/index.html
+[Installation Guide]: https://guides.dataverse.org/en/latest/installation/index.html
 [latest release]: https://github.com/IQSS/dataverse/releases
 [features]: https://dataverse.org/software-features
 [roadmap]: https://www.iq.harvard.edu/roadmap-dataverse-project
 [integrations]: https://dataverse.org/integrations
-[REST APIs]: http://guides.dataverse.org/en/latest/api/index.html
+[REST APIs]: https://guides.dataverse.org/en/latest/api/index.html
 [Contributing Guide]: CONTRIBUTING.md
 [mailing list]: https://groups.google.com/group/dataverse-community
 [community call]: https://dataverse.org/community-calls
-[chat.dataverse.org]: http://chat.dataverse.org
+[chat.dataverse.org]: https://chat.dataverse.org
 [Dataverse Community Meeting]: https://dataverse.org/events
 [open source]: LICENSE.md

doc/sphinx-guides/source/_static/navbarscroll.js

@@ -1,6 +1,6 @@
 /*  
     Use to fix hidden section headers behind the navbar when using links with targets
-    See: http://stackoverflow.com/questions/10732690/offsetting-an-html-anchor-to-adjust-for-fixed-header    
+    See: https://stackoverflow.com/questions/10732690/offsetting-an-html-anchor-to-adjust-for-fixed-header    
 */
 $jqTheme(document).ready(function() {
   $jqTheme('a[href*="#"]:not([href="#"])').on('click', function() {

doc/sphinx-guides/source/_templates/navbar.html

@@ -15,7 +15,7 @@
                 <span class="icon-bar"></span>
                 <span class="icon-bar"></span>
             </button>
-            <a class="navbar-brand" href="http://dataverse.org" id="dataverse-org-homepage-url">Dataverse Project</a>
+            <a class="navbar-brand" href="https://dataverse.org" id="dataverse-org-homepage-url">Dataverse Project</a>
         </div>
         <!-- Collect the nav links, forms, and other content for toggling -->
 
@@ -24,15 +24,15 @@
                 <li class="dropdown">
                     <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">About <span class="caret"></span></a>
                     <ul class="dropdown-menu">
-                        <li><a target="_blank" href="http://dataverse.org/about">About the Project</a></li>
-                        <li><a target="_blank" href="http://dataverse.org/add-data">Add Data</a></li>
-                        <li><a target="_blank" href="http://dataverse.org/blog">Blog</a></li>
-                        <li><a target="_blank" href="http://dataverse.org/presentations">Presentations</a></li>
-                        <li><a target="_blank" href="http://dataverse.org/publications">Publications</a></li>
+                        <li><a target="_blank" href="https://dataverse.org/about">About the Project</a></li>
+                        <li><a target="_blank" href="https://dataverse.org/add-data">Add Data</a></li>
+                        <li><a target="_blank" href="https://dataverse.org/blog">Blog</a></li>
+                        <li><a target="_blank" href="https://dataverse.org/presentations">Presentations</a></li>
+                        <li><a target="_blank" href="https://dataverse.org/publications">Publications</a></li>
                     </ul>
                 </li>
                 <li>
-                    <a target="_blank" href="http://dataverse.org/">
+                    <a target="_blank" href="https://dataverse.org/">
                         Community
                     </a>
                 </li>
@@ -49,18 +49,18 @@
                 <li>
                     <a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="false">Software <span class="caret"></span></a>
                     <ul class="dropdown-menu">
-                        <li><a target="_blank" href="http://dataverse.org/software-features">Features</a></li>
-                        <li><a target="_blank" href="http://github.com/IQSS/dataverse">Source Code</a></li>
-                        <li><a target="_blank" href="http://guides.dataverse.org/en/latest/user/index.html">User Guide</a></li>
-                        <li><a target="_blank" href="http://guides.dataverse.org/en/latest/installation/index.html">Installation Guide</a></li>
-                        <li><a target="_blank" href="http://guides.dataverse.org/en/latest/api/index.html">API Guide</a></li>
-                        <li><a target="_blank" href="http://guides.dataverse.org/en/latest/developers/index.html">Developer Guide</a></li>
-                        <li><a target="_blank" href="http://guides.dataverse.org/en/latest/style/index.html">Style Guide</a></li>
-                        <li><a target="_blank" href="http://guides.dataverse.org/en/latest/admin/index.html">Admin Guide</a></li>
+                        <li><a target="_blank" href="https://dataverse.org/software-features">Features</a></li>
+                        <li><a target="_blank" href="https://github.com/IQSS/dataverse">Source Code</a></li>
+                        <li><a target="_blank" href="https://guides.dataverse.org/en/latest/user/index.html">User Guide</a></li>
+                        <li><a target="_blank" href="https://guides.dataverse.org/en/latest/installation/index.html">Installation Guide</a></li>
+                        <li><a target="_blank" href="https://guides.dataverse.org/en/latest/api/index.html">API Guide</a></li>
+                        <li><a target="_blank" href="https://guides.dataverse.org/en/latest/developers/index.html">Developer Guide</a></li>
+                        <li><a target="_blank" href="https://guides.dataverse.org/en/latest/style/index.html">Style Guide</a></li>
+                        <li><a target="_blank" href="https://guides.dataverse.org/en/latest/admin/index.html">Admin Guide</a></li>
                     </ul>
                 </li>
                 <li>
-                    <a target="_blank" href="http://dataverse.org/">
+                    <a target="_blank" href="https://dataverse.org/">
                         Contact
                     </a>
                 </li>

doc/sphinx-guides/source/admin/monitoring.rst

@@ -14,7 +14,7 @@ In production you'll want to monitor the usual suspects such as CPU, memory, fre
 Munin
 +++++
 
-http://munin-monitoring.org says, "A default installation provides a lot of graphs with almost no work." From RHEL or CentOS 7, you can try the following steps.
+https://munin-monitoring.org says, "A default installation provides a lot of graphs with almost no work." From RHEL or CentOS 7, you can try the following steps.
 
 Enable the EPEL yum repo (if you haven't already):
 

doc/sphinx-guides/source/api/client-libraries.rst

@@ -24,7 +24,7 @@ Java
 
 https://github.com/IQSS/dataverse-client-java is the official Java library for Dataverse APIs.
 
-`Richard Adams <http://www.researchspace.com/electronic-lab-notebook/about_us_team.html>`_ from `ResearchSpace <http://www.researchspace.com>`_ created and maintains this library.
+`Richard Adams <https://www.researchspace.com/electronic-lab-notebook/about_us_team.html>`_ from `ResearchSpace <https://www.researchspace.com>`_ created and maintains this library.
 
 Javascript
 ----------
@@ -54,7 +54,7 @@ There are multiple Python modules for interacting with Dataverse APIs.
 
 `python-dvuploader <https://github.com/gdcc/python-dvuploader>`_ implements Jim Myers' excellent `dv-uploader <https://github.com/GlobalDataverseCommunityConsortium/dataverse-uploader>`_ as a Python module. It offers parallel direct uploads to Dataverse backend storage, streams files directly instead of buffering them in memory, and supports multi-part uploads, chunking data accordingly.
 
-`pyDataverse <https://github.com/gdcc/pyDataverse>`_ primarily allows developers to manage Dataverse collections, datasets and datafiles. Its intention is to help with data migrations and DevOps activities such as testing and configuration management. The module is developed by `Stefan Kasberger <http://stefankasberger.at>`_ from `AUSSDA - The Austrian Social Science Data Archive <https://aussda.at>`_.  
+`pyDataverse <https://github.com/gdcc/pyDataverse>`_ primarily allows developers to manage Dataverse collections, datasets and datafiles. Its intention is to help with data migrations and DevOps activities such as testing and configuration management. The module is developed by `Stefan Kasberger <https://stefankasberger.at>`_ from `AUSSDA - The Austrian Social Science Data Archive <https://aussda.at>`_.  
 
 `UBC's Dataverse Utilities <https://ubc-library-rc.github.io/dataverse_utils/>`_ are a set of Python console utilities which allow one to upload datasets from a tab-separated-value spreadsheet, bulk release multiple datasets, bulk delete unpublished datasets, quickly duplicate records. replace licenses, and more. For additional information see their `PyPi page <https://pypi.org/project/dataverse-utils/>`_.
 
@@ -68,8 +68,7 @@ R
 https://github.com/IQSS/dataverse-client-r is the official R package for Dataverse APIs. The latest release can be installed from `CRAN <https://cran.r-project.org/package=dataverse>`_. 
 The R client can search and download datasets. It is useful when automatically (instead of manually) downloading data files as part of a script. For bulk edit and upload operations, we currently recommend pyDataverse.
 
-The package is currently maintained by  `Shiro Kuriwaki <https://github.com/kuriwaki>`_. It was originally created by `Thomas Leeper <http://thomasleeper.com>`_ and then formerly maintained by `Will Beasley <https://github.com/wibeasley>`_.
-
+The package is currently maintained by  `Shiro Kuriwaki <https://github.com/kuriwaki>`_. It was originally created by `Thomas Leeper <https://thomasleeper.com>`_ and then formerly maintained by `Will Beasley <https://github.com/wibeasley>`_.
 
 Ruby
 ----

doc/sphinx-guides/source/api/external-tools.rst

@@ -11,7 +11,7 @@ Introduction
 
 External tools are additional applications the user can access or open from your Dataverse installation to preview, explore, and manipulate data files and datasets. The term "external" is used to indicate that the tool is not part of the main Dataverse Software.
 
-Once you have created the external tool itself (which is most of the work!), you need to teach a Dataverse installation how to construct URLs that your tool needs to operate. For example, if you've deployed your tool to fabulousfiletool.com your tool might want the ID of a file and the siteUrl of the Dataverse installation like this: https://fabulousfiletool.com?fileId=42&siteUrl=http://demo.dataverse.org
+Once you have created the external tool itself (which is most of the work!), you need to teach a Dataverse installation how to construct URLs that your tool needs to operate. For example, if you've deployed your tool to fabulousfiletool.com your tool might want the ID of a file and the siteUrl of the Dataverse installation like this: https://fabulousfiletool.com?fileId=42&siteUrl=https://demo.dataverse.org
 
 In short, you will be creating a manifest in JSON format that describes not only how to construct URLs for your tool, but also what types of files your tool operates on, where it should appear in the Dataverse installation web interfaces, etc. 
 
@@ -102,7 +102,7 @@ Terminology
 
     httpMethod                   Either ``GET`` or ``POST``.
 
-    queryParameters              **Key/value combinations** that can be appended to the toolUrl. For example, once substitution takes place (described below) the user may be redirected to ``https://fabulousfiletool.com?fileId=42&siteUrl=http://demo.dataverse.org``.
+    queryParameters              **Key/value combinations** that can be appended to the toolUrl. For example, once substitution takes place (described below) the user may be redirected to ``https://fabulousfiletool.com?fileId=42&siteUrl=https://demo.dataverse.org``.
 
     query parameter keys         An **arbitrary string** to associate with a value that is populated with a reserved word (described below). As the author of the tool, you have control over what "key" you would like to be passed to your tool. For example, if you want to have your tool receive and operate on the query parameter "dataverseFileId=42" instead of just "fileId=42", that's fine.
 

doc/sphinx-guides/source/api/getting-started.rst

@@ -9,7 +9,7 @@ If you are a researcher or curator who wants to automate parts of your workflow,
 Servers You Can Test With
 -------------------------
 
-Rather than using a production Dataverse installation, API users are welcome to use http://demo.dataverse.org for testing. You can email support@dataverse.org if you have any trouble with this server.  
+Rather than using a production Dataverse installation, API users are welcome to use https://demo.dataverse.org for testing. You can email support@dataverse.org if you have any trouble with this server.  
 
 If you would rather have full control over your own test server, deployments to AWS, Docker, and more are covered in the :doc:`/developers/index` and the :doc:`/installation/index`.
 

doc/sphinx-guides/source/api/intro.rst

@@ -237,7 +237,7 @@ Dataverse Software API questions are on topic in all the usual places:
 
 - The dataverse-community Google Group: https://groups.google.com/forum/#!forum/dataverse-community
 - The Dataverse Project community calls: https://dataverse.org/community-calls
-- The Dataverse Project chat room: http://chat.dataverse.org 
+- The Dataverse Project chat room: https://chat.dataverse.org 
 - The Dataverse Project ticketing system: support@dataverse.org
 
 After your question has been answered, you are welcome to help improve the :doc:`faq` section of this guide.

doc/sphinx-guides/source/api/native-api.rst

@@ -9,7 +9,7 @@ The Dataverse Software exposes most of its GUI functionality via a REST-based AP
 
 .. _CORS: https://www.w3.org/TR/cors/
 
-.. warning:: The Dataverse Software's API is versioned at the URI - all API calls may include the version number like so: ``http://server-address/api/v1/...``. Omitting the ``v1`` part would default to the latest API version (currently 1). When writing scripts/applications that will be used for a long time, make sure to specify the API version, so they don't break when the API is upgraded.
+.. warning:: The Dataverse Software's API is versioned at the URI - all API calls may include the version number like so: ``https://server-address/api/v1/...``. Omitting the ``v1`` part would default to the latest API version (currently 1). When writing scripts/applications that will be used for a long time, make sure to specify the API version, so they don't break when the API is upgraded.
 
 .. contents:: |toctitle|
     :local:
@@ -503,7 +503,7 @@ The fully expanded example above (without environment variables) looks like this
 
   curl -H "X-Dataverse-key:xxxxxxxx-xxxx-xxxx-xxxx-xxxxxxxxxxxx" -X PUT "https://demo.dataverse.org/api/dataverses/root/metadatablocks/isRoot"
 
-.. note:: Previous endpoints ``$SERVER/api/dataverses/$id/metadatablocks/:isRoot`` and ``POST http://$SERVER/api/dataverses/$id/metadatablocks/:isRoot?key=$apiKey`` are deprecated, but supported.
+.. note:: Previous endpoints ``$SERVER/api/dataverses/$id/metadatablocks/:isRoot`` and ``POST https://$SERVER/api/dataverses/$id/metadatablocks/:isRoot?key=$apiKey`` are deprecated, but supported.
 
 
 .. _create-dataset-command: 
@@ -795,7 +795,7 @@ Getting its draft version:
   export SERVER_URL=https://demo.dataverse.org
   export PERSISTENT_IDENTIFIER=doi:10.5072/FK2/J8SJZB
 
-  curl -H "X-Dataverse-key:$API_TOKEN" "http://$SERVER/api/datasets/:persistentId/versions/:draft?persistentId=$PERSISTENT_IDENTIFIER"
+  curl -H "X-Dataverse-key:$API_TOKEN" "https://$SERVER/api/datasets/:persistentId/versions/:draft?persistentId=$PERSISTENT_IDENTIFIER"
 
 The fully expanded example above (without environment variables) looks like this:
 
@@ -2857,7 +2857,7 @@ The fully expanded example above (without environment variables) looks like this
 Currently the following methods are used to detect file types:
 
 - The file type detected by the browser (or sent via API).
-- JHOVE: http://jhove.openpreservation.org
+- JHOVE: https://jhove.openpreservation.org
 - The file extension (e.g. ".ipybn") is used, defined in a file called ``MimeTypeDetectionByFileExtension.properties``.
 - The file name (e.g. "Dockerfile") is used, defined in a file called ``MimeTypeDetectionByFileName.properties``.
 
@@ -3202,7 +3202,7 @@ The fully expanded example above (without environment variables) looks like this
 
   curl -H "X-Dataverse-key:xxxxxxxx-xxxx-xxxx-xxxx-xxxxxxxxxxxx" -X POST \
     -F 'jsonData={"description":"My description bbb.","provFreeform":"Test prov freeform","categories":["Data"],"dataFileTags":["Survey"],"restrict":false}' \
-    "http://demo.dataverse.org/api/files/24/metadata"
+    "https://demo.dataverse.org/api/files/24/metadata"
 
 A curl example using a ``PERSISTENT_ID``