[2023-01-27T22:47:33.327+0000] [Payara 5.2022.3] [INFO] [] [edu.harvard.iq.dataverse.provenance.ProvInvestigator] [tid: _ThreadID=95 _ThreadName=http-thread-pool::jk-connector(4)] [timeMillis: 1674859653327] [levelValue: 800] [[ Prov file error : org.json.JSONException: A JSONObject text must begin with '{' at 1 [character 2 line 1]]] [2023-01-27T22:47:33.327+0000] [Payara 5.2022.3] [INFO] [] [edu.harvard.iq.dataverse.provenance.ProvPopupFragmentBean] [tid: _ThreadID=95 _ThreadName=http-thread-pool::jk-connector(4)] [timeMillis: 1674859653327] [levelValue: 800] [[ The uploaded provenance file does not comply with the W3C Provenance standard.]] [2023-01-27T22:47:50.977+0000] [Payara 5.2022.3] [WARNING] [] [javax.enterprise.resource.webcontainer.jsf.lifecycle] [tid: _ThreadID=94 _ThreadName=http-thread-pool::jk-connector(3)] [timeMillis: 1674859670977] [levelValue: 900] [[ /provenance-popups-fragment.xhtml @162,269 actionListener="#{provPopupFragmentBean.showJsonPreviewNewWindow()}": java.lang.NullPointerException javax.el.ELException: /provenance-popups-fragment.xhtml @162,269 actionListener="#{provPopupFragmentBean.showJsonPreviewNewWindow()}": java.lang.NullPointerException at com.sun.faces.facelets.el.TagMethodExpression.invoke(TagMethodExpression.java:71) at javax.faces.event.MethodExpressionActionListener.processAction(MethodExpressionActionListener.java:124) at javax.faces.event.ActionEvent.processListener(ActionEvent.java:72) at javax.faces.component.UIComponentBase.broadcast(UIComponentBase.java:490) at javax.faces.component.UICommand.broadcast(UICommand.java:211) at javax.faces.component.UIViewRoot.broadcastEvents(UIViewRoot.java:847) at javax.faces.component.UIViewRoot.processDecodes(UIViewRoot.java:1012) at com.sun.faces.lifecycle.ApplyRequestValuesPhase.execute(ApplyRequestValuesPhase.java:55) at com.sun.faces.lifecycle.Phase.doPhase(Phase.java:76) at com.sun.faces.lifecycle.LifecycleImpl.execute(LifecycleImpl.java:177) at javax.faces.webapp.FacesServlet.executeLifecyle(FacesServlet.java:707) at javax.faces.webapp.FacesServlet.service(FacesServlet.java:451) at org.apache.catalina.core.StandardWrapper.service(StandardWrapper.java:1637) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:331) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211) at org.glassfish.tyrus.servlet.TyrusServletFilter.doFilter(TyrusServletFilter.java:282) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:253) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211) at org.ocpsoft.rewrite.servlet.RewriteFilter.doFilter(RewriteFilter.java:226) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:253) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:257) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:160) at org.apache.catalina.core.StandardPipeline.doInvoke(StandardPipeline.java:757) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:577) at com.sun.enterprise.web.WebPipeline.invoke(WebPipeline.java:99) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:158) at org.apache.catalina.connector.CoyoteAdapter.doService(CoyoteAdapter.java:372) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:239) at com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:520) at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:217) at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:182) at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:156) at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:201) at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:95) at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:260) at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:177) at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:109) at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:88) at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:53) at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:524) at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:89) at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:94) at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.access$100(WorkerThreadIOStrategy.java:33) at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:114) at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:569) at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:549) at java.base/java.lang.Thread.run(Thread.java:829) Caused by: java.lang.NullPointerException at java.base/java.io.Writer.write(Writer.java:249) at edu.harvard.iq.dataverse.provenance.ProvPopupFragmentBean.showJsonPreviewNewWindow(ProvPopupFragmentBean.java:503) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:566) at javax.el.ELUtil.invokeMethod(ELUtil.java:239) at javax.el.BeanELResolver.invoke(BeanELResolver.java:440) at javax.el.CompositeELResolver.invoke(CompositeELResolver.java:198) at com.sun.el.parser.AstValue.invoke(AstValue.java:257) at com.sun.el.MethodExpressionImpl.invoke(MethodExpressionImpl.java:237) at org.jboss.weld.module.web.util.el.ForwardingMethodExpression.invoke(ForwardingMethodExpression.java:40) at org.jboss.weld.module.web.el.WeldMethodExpression.invoke(WeldMethodExpression.java:50) at com.sun.faces.facelets.el.TagMethodExpression.invoke(TagMethodExpression.java:65) ... 47 more ]] [2023-01-27T22:47:50.978+0000] [Payara 5.2022.3] [WARNING] [] [javax.enterprise.web] [tid: _ThreadID=94 _ThreadName=http-thread-pool::jk-connector(3)] [timeMillis: 1674859670978] [levelValue: 900] [[ StandardWrapperValve[Faces Servlet]: Servlet.service() for servlet Faces Servlet threw exception java.lang.NullPointerException at java.base/java.io.Writer.write(Writer.java:249) at edu.harvard.iq.dataverse.provenance.ProvPopupFragmentBean.showJsonPreviewNewWindow(ProvPopupFragmentBean.java:503) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:566) at javax.el.ELUtil.invokeMethod(ELUtil.java:239) at javax.el.BeanELResolver.invoke(BeanELResolver.java:440) at javax.el.CompositeELResolver.invoke(CompositeELResolver.java:198) at com.sun.el.parser.AstValue.invoke(AstValue.java:257) at com.sun.el.MethodExpressionImpl.invoke(MethodExpressionImpl.java:237) at org.jboss.weld.module.web.util.el.ForwardingMethodExpression.invoke(ForwardingMethodExpression.java:40) at org.jboss.weld.module.web.el.WeldMethodExpression.invoke(WeldMethodExpression.java:50) at com.sun.faces.facelets.el.TagMethodExpression.invoke(TagMethodExpression.java:65) at javax.faces.event.MethodExpressionActionListener.processAction(MethodExpressionActionListener.java:124) at javax.faces.event.ActionEvent.processListener(ActionEvent.java:72) at javax.faces.component.UIComponentBase.broadcast(UIComponentBase.java:490) at javax.faces.component.UICommand.broadcast(UICommand.java:211) at javax.faces.component.UIViewRoot.broadcastEvents(UIViewRoot.java:847) at javax.faces.component.UIViewRoot.processDecodes(UIViewRoot.java:1012) at com.sun.faces.lifecycle.ApplyRequestValuesPhase.execute(ApplyRequestValuesPhase.java:55) at com.sun.faces.lifecycle.Phase.doPhase(Phase.java:76) at com.sun.faces.lifecycle.LifecycleImpl.execute(LifecycleImpl.java:177) at javax.faces.webapp.FacesServlet.executeLifecyle(FacesServlet.java:707) at javax.faces.webapp.FacesServlet.service(FacesServlet.java:451) at org.apache.catalina.core.StandardWrapper.service(StandardWrapper.java:1637) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:331) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211) at org.glassfish.tyrus.servlet.TyrusServletFilter.doFilter(TyrusServletFilter.java:282) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:253) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211) at org.ocpsoft.rewrite.servlet.RewriteFilter.doFilter(RewriteFilter.java:226) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:253) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:211) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:257) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:160) at org.apache.catalina.core.StandardPipeline.doInvoke(StandardPipeline.java:757) at org.apache.catalina.core.StandardPipeline.invoke(StandardPipeline.java:577) at com.sun.enterprise.web.WebPipeline.invoke(WebPipeline.java:99) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:158) at org.apache.catalina.connector.CoyoteAdapter.doService(CoyoteAdapter.java:372) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:239) at com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:520) at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:217) at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:182) at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:156) at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:201) at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:95) at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:260) at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:177) at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:109) at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:88) at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:53) at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:524) at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:89) at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:94) at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.access$100(WorkerThreadIOStrategy.java:33) at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:114) at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:569) at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:549) at java.base/java.lang.Thread.run(Thread.java:829) ]]