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layout ontology_detail
id gecko
title Genomics Cohorts Knowledge Ontology
contact
email github label orcid
rbca.jackson@gmail.com
beckyjackson
Rebecca Jackson
0000-0003-4871-5569
description An ontology to represent genomics cohort attributes
domain organisms
homepage https://github.com/IHCC-cohorts/GECKO
license
label url
CC BY 4.0
preferredPrefix GECKO
products
id
gecko.owl
repository https://github.com/IHCC-cohorts/GECKO
tags
cohort studies
tracker https://github.com/IHCC-cohorts/GECKO/issues
usages
description user
IHCC uses GECKO to standardize data from various cohorts for the IHCC cohort browser
activity_status active

Genomics Cohorts Knowledge Ontology (GECKO) is an ontology to represent genomics cohort attributes. The GECKO is maintained by the CINECA project, and standardises attributes commonly used for genomics cohort description as well as individual-level data items. A series of tools is being developed to enable automated generation of harmonised data files based on a JSON schema mapping file. For more information please contact CINECA.