graphdb-benchmarks/src/main/assembly/resources/gremlin/270_lngSmf.gremlin at master · Rothamsted/graphdb-benchmarks · GitHub

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g.V().hasLabel ( 'Concept:Gene:Resource' )
  .out ( 'enc' ).hasLabel ( 'Concept:Protein:Resource' )

  .emit ()
  .repeat ( both ( 'h_s_s', 'ortho', 'xref' ).simplePath() )
  .times ( 3 )

  .hasLabel ( 'Concept:Protein:Resource' )

  .both ( 'is_a', 'ac_by' ).hasLabel ( 'Concept:Enzyme:Resource' )
  .out ( 'ac_by', 'in_by' ).hasLabel ( 'Comp:Concept:Resource' )
  .out ( 'cs_by', 'pd_by' ).hasLabel ( 'Concept:Resource:Transport' )

  .repeat ( out ( 'part_of' ).simplePath() )
  .emit ()
  .times ( 3 )

  .hasLabel ( 'Concept:Path:Resource' )

  .repeat ( in ( 'part_of' ).simplePath () )
  .emit ()
  .times ( 3 )

  .hasLabel ( 'Concept:Reaction:Resource' )

  // Go back to other proteins in this reaction
  // optional() is to achieve the same behaviour as in the Cypher and SPARQL queries

  .optional (
    emit ()
    .repeat ( __.in ( 'cs_by', 'pd_by' ).simplePath () )
    .times ( 3 )

    .hasLabel ( 'Concept:Protein:Resource' )

    .emit ()
    .repeat ( both ( 'h_s_s', 'ortho', 'xref' ).simplePath () )
    .times ( 2 )

    .hasLabel ( 'Concept:Protein:Resource' )

    .optional ( __.in ( 'enc' ) ) // Gene
  )

.path ().by ( 'iri' )
.limit ( 100 )