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@@ -33,78 +33,78 @@ @unpublished{Pochon2022-hj
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}
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@article{zampirolo2024tracing,
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title={Tracing early pastoralism in Central Europe using sedimentary ancient DNA},
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author={Zampirolo, Giulia and Holman, Luke E and Sawafuji, Rikai and Pt{\'a}kov{\'a}, Michaela and Kova{\v{c}}ikov{\'a}, Lenka and {\v{S}}{\'\i}da, Petr and Pokorn{\`y}, Petr and Pedersen, Mikkel Winther and Walls, Matthew},
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journal={Current Biology},
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volume={34},
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number={20},
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pages={4650--4661},
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year={2024},
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publisher={Elsevier}
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doi= {10.1016/j.cub.2024.08.047}
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url = {https://doi.org/10.1016/j.cub.2024.08.047}
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title = {Tracing early pastoralism in Central Europe using sedimentary ancient DNA},
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author = {Zampirolo, Giulia and Holman, Luke E and Sawafuji, Rikai and Pt{\'a}kov{\'a}, Michaela and Kova{\v{c}}ikov{\'a}, Lenka and {\v{S}}{\'\i}da, Petr and Pokorn{\`y}, Petr and Pedersen, Mikkel Winther and Walls, Matthew},
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journal = {Current Biology},
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volume = {34},
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number = {20},
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pages = {4650--4661},
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year = {2024},
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publisher = {Elsevier},
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doi = {10.1016/j.cub.2024.08.047},
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url = {https://doi.org/10.1016/j.cub.2024.08.047}
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}
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@article{Pedersen2015,
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title = {Ancient and modern environmental DNA},
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volume = {370},
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ISSN = {1471-2970},
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url = {http://dx.doi.org/10.1098/rstb.2013.0383},
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DOI = {10.1098/rstb.2013.0383},
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number = {1660},
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journal = {Philosophical Transactions of the Royal Society B: Biological Sciences},
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title = {Ancient and modern environmental DNA},
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volume = {370},
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issn = {1471-2970},
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url = {http://dx.doi.org/10.1098/rstb.2013.0383},
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doi = {10.1098/rstb.2013.0383},
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number = {1660},
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journal = {Philosophical Transactions of the Royal Society B: Biological Sciences},
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publisher = {The Royal Society},
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author = {Pedersen, Mikkel Winther and Overballe-Petersen, Søren and Ermini, Luca and Sarkissian, Clio Der and Haile, James and Hellstrom, Micaela and Spens, Johan and Thomsen, Philip Francis and Bohmann, Kristine and Cappellini, Enrico and Schnell, Ida Bærholm and Wales, Nathan A. and Carøe, Christian and Campos, Paula F. and Schmidt, Astrid M. Z. and Gilbert, M. Thomas P. and Hansen, Anders J. and Orlando, Ludovic and Willerslev, Eske},
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year = {2015},
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month = jan,
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pages = {20130383}
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author = {Pedersen, Mikkel Winther and Overballe-Petersen, Søren and Ermini, Luca and Sarkissian, Clio Der and Haile, James and Hellstrom, Micaela and Spens, Johan and Thomsen, Philip Francis and Bohmann, Kristine and Cappellini, Enrico and Schnell, Ida Bærholm and Wales, Nathan A. and Carøe, Christian and Campos, Paula F. and Schmidt, Astrid M. Z. and Gilbert, M. Thomas P. and Hansen, Anders J. and Orlando, Ludovic and Willerslev, Eske},
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year = {2015},
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month = jan,
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pages = {20130383}
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}
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@article{Kistler2017,
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title = {A new model for ancient DNA decay based on paleogenomic meta-analysis},
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volume = {45},
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ISSN = {1362-4962},
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url = {http://dx.doi.org/10.1093/nar/gkx361},
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DOI = {10.1093/nar/gkx361},
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number = {11},
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journal = {Nucleic Acids Research},
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title = {A new model for ancient DNA decay based on paleogenomic meta-analysis},
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volume = {45},
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issn = {1362-4962},
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url = {http://dx.doi.org/10.1093/nar/gkx361},
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doi = {10.1093/nar/gkx361},
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number = {11},
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journal = {Nucleic Acids Research},
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publisher = {Oxford University Press (OUP)},
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author = {Kistler, Logan and Ware, Roselyn and Smith, Oliver and Collins, Matthew and Allaby, Robin G.},
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year = {2017},
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month = may,
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pages = {6310–6320}
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author = {Kistler, Logan and Ware, Roselyn and Smith, Oliver and Collins, Matthew and Allaby, Robin G.},
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year = {2017},
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month = may,
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pages = {6310–6320}
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}
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@article{Michelsen2022,
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title = {metaDMG – A Fast and Accurate Ancient DNA Damage Toolkit for Metagenomic Data},
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url = {http://dx.doi.org/10.1101/2022.12.06.519264},
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DOI = {10.1101/2022.12.06.519264},
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title = {metaDMG – A Fast and Accurate Ancient DNA Damage Toolkit for Metagenomic Data},
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url = {http://dx.doi.org/10.1101/2022.12.06.519264},
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doi = {10.1101/2022.12.06.519264},
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publisher = {Cold Spring Harbor Laboratory},
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author = {Michelsen, Christian and Pedersen, Mikkel Winther and Fernandez-Guerra, Antonio and Zhao, Lei and Petersen, Troels C. and Korneliussen, Thorfinn Sand},
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year = {2022},
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month = dec
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author = {Michelsen, Christian and Pedersen, Mikkel Winther and Fernandez-Guerra, Antonio and Zhao, Lei and Petersen, Troels C. and Korneliussen, Thorfinn Sand},
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year = {2022},
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month = dec
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}
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@ARTICLE{Wang2022-fr,
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title = "\textit{ngs}LCA—A toolkit for fast and flexible lowest common
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ancestor inference and taxonomic profiling of metagenomic data",
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author = "Wang, Yucheng and Korneliussen, Thorfinn Sand and Holman, Luke E
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and Manica, Andrea and Pedersen, Mikkel Winther",
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journal = "Methods in ecology and evolution",
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publisher = "Wiley",
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volume = 13,
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number = 12,
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pages = "2699--2708",
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abstract = "Methods in Ecology and Evolution is an open access journal
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@article{Wang2022-fr,
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title = {\textit{ngs}LCA—A toolkit for fast and flexible lowest common
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ancestor inference and taxonomic profiling of metagenomic data},
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author = {Wang, Yucheng and Korneliussen, Thorfinn Sand and Holman, Luke E
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and Manica, Andrea and Pedersen, Mikkel Winther},
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journal = {Methods in ecology and evolution},
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publisher = {Wiley},
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volume = 13,
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number = 12,
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pages = {2699--2708},
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abstract = {Methods in Ecology and Evolution is an open access journal
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publishing papers across a wide range of subdisciplines,
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disseminating new methods in ecology and evolution.",
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month = dec,
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year = 2022,
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url = "https://onlinelibrary.wiley.com/doi/abs/10.1111/2041-210X.14006",
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keywords = "environmental DNA (eDNA); lowest common ancestor (LCA);
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disseminating new methods in ecology and evolution.},
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month = dec,
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year = 2022,
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url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/2041-210X.14006},
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keywords = {environmental DNA (eDNA); lowest common ancestor (LCA);
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metagenomics; next-generation sequencing; sedimentary ancient DNA
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(sedaDNA); shotgun sequencing; taxonomic profiling; toolkit",
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doi = "10.1111/2041-210x.14006",
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issn = "2041-210X",
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language = "en"
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(sedaDNA); shotgun sequencing; taxonomic profiling; toolkit},
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doi = {10.1111/2041-210x.14006},
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issn = {2041-210X},
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language = {en}
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}

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