Reduce ConcatVCF resources to sane levels

marcelm · marcelm · commit 1bd872738c24 · 2017-10-19T21:37:01.000+02:00
ConcatVCF does not need much memory and giving it more than 8 cores
does not make it faster.
diff --git a/configuration/uppmax-localhost.config b/configuration/uppmax-localhost.config
@@ -57,8 +57,7 @@ process {
   // These processes are defined in main.nf
 
   $ConcatVCF {
-    cpus = 16
-    memory = {params.totalMemory}
+    cpus = 8
   }
   $CreateRecalibrationTable {
     cpus = 16

Original file line number	Diff line number	Diff line change
`@@ -57,8 +57,7 @@ process {`
`57`	`57`	`// These processes are defined in main.nf`
`58`	`58`
`59`	`59`	`$ConcatVCF {`
`60`		`- cpus = 16`
`61`		`- memory = {params.totalMemory}`
	`60`	`+ cpus = 8`
`62`	`61`	`}`
`63`	`62`	`$CreateRecalibrationTable {`
`64`	`63`	`cpus = 16`