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Commit 416f42e

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fix runFastQC process
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main.nf

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@@ -142,7 +142,7 @@ if (params.verbose) bamFiles = bamFiles.view {
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process RunFastQC {
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tag {idPatient + "-" + idRun}
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publishDir "${directoryMap.fastQC}/${idRun}/${it}", mode: 'link'
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publishDir "${directoryMap.fastQC}/${idRun}", mode: 'link'
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input:
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set idPatient, status, idSample, idRun, file(fastqFile1), file(fastqFile2) from fastqFilesforFastQC

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