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Expand file tree Collapse file tree Original file line number Diff line number Diff line change @@ -11,6 +11,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.
1111
1212- [ #710 ] ( https://github.com/SciLifeLab/Sarek/pull/710 ) - Improve release checklist and script
1313- [ #711 ] ( https://github.com/SciLifeLab/Sarek/pull/711 ) - Improve configuration priorities
14+ - [ #716 ] ( https://github.com/SciLifeLab/Sarek/pull/716 ) - Update paths to containers and iGenomes
1415
1516### ` Removed `
1617- [ #715 ] ( https://github.com/SciLifeLab/Sarek/pull/715 ) - Remove ` defReferencesFiles ` function from ` buildReferences.nf `
Original file line number Diff line number Diff line change 1111}
1212
1313params {
14- containerPath = '/btb/containers/'
15- genome_base = params.genome == 'GRCh37' ? '/btb/references/Homo_sapiens/GATK/GRCh37/' : params.genome == 'GRCh38' ? '/btb/references/Homo_sapiens/GATK/GRCh38/' : 'References/smallGRCh37'
14+ containerPath = '/data0/ btb/containers/'
15+ genome_base = params.genome == 'GRCh37' ? '/data0/ btb/references/igenomes/ Homo_sapiens/GATK/GRCh37/' : params.genome == 'GRCh38' ? '/data0/ btb/references/igenomes /Homo_sapiens/GATK/GRCh38/' : 'References/smallGRCh37'
1616 singleCPUMem = 15.GB
1717 totalMemory = 754.GB
1818}
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