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This repository was archived by the owner on Jan 27, 2020. It is now read-only.

Commit e3d7141

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author
Szilveszter Juhos
committed
fixing config r-params-base typo
1 parent 0030b8b commit e3d7141

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Lines changed: 2 additions & 2 deletions

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configuration/singularity-path.config

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -33,10 +33,10 @@ process {
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$RealignerTargetCreator.container = "${params.containerPath}/gatk-${params.tag}.img"
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$RecalibrateBam.container = "${params.containerPath}/gatk-${params.tag}.img"
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$RunAlleleCount.container = "${params.containerPath}/runallelecount-${params.tag}.img"
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$RunAscat.container = "${params.containerPath}/r-params.base-${params.tag}.img"
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$RunAscat.container = "${params.containerPath}/r-base-${params.tag}.img"
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$RunBamQC.container = "${params.containerPath}/qualimap-${params.tag}.img"
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$RunBcftoolsStats.container = "${params.containerPath}/caw-${params.tag}.img"
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$RunConvertAlleleCounts.container = "${params.containerPath}/r-params.base-${params.tag}.img"
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$RunConvertAlleleCounts.container = "${params.containerPath}/r-base-${params.tag}.img"
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$RunFastQC.container = "${params.containerPath}/fastqc-${params.tag}.img"
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$RunFreeBayes.container = "${params.containerPath}/freebayes-${params.tag}.img"
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$RunGenotypeGVCFs.container = "${params.containerPath}/gatk-${params.tag}.img"

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