diff --git a/CHANGELOG.md b/CHANGELOG.md index 51aa88fd9d..74489cbc6a 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -14,6 +14,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0. ### `Fixed` - [#665](https://github.com/SciLifeLab/Sarek/pull/665) - Input bam file now has always the same name (whether it is from a single fastq pair or multiple) in the MarkDuplicates process, so metrics too +- [#672](https://github.com/SciLifeLab/Sarek/pull/672) - process `PullSingularityContainers` from `buildContainers.nf` now expect a file with the correct `.simg` extension for singularity images, and no longer the `.img` one. ## [2.2.1] - 2018-10-04 diff --git a/buildContainers.nf b/buildContainers.nf index c5706dc981..197a6f5a5d 100644 --- a/buildContainers.nf +++ b/buildContainers.nf @@ -92,7 +92,7 @@ process PullSingularityContainers { val container from singularityContainers output: - file("${container}-${params.tag}.img") into imagePulled + file("${container}-${params.tag}.simg") into imagePulled when: params.singularity