-DBUILD_PARALLEL=ON fails on mac (at least)

[doutriaux1]

maybe as simple as a tweak to setup_runtime.[c]sh

[dash:~/ACME-data] mccoy20% /Users/mccoy20/uvcdat-app/14-09-16/bin/python gen_pngs.py

Traceback (most recent call last):

  File "gen_pngs.py", line 1, in <module>

    import vcs, cdms2, os, sys

  File "/Users/mccoy20/uvcdat-app/14-09-16/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/vcs/__init__.py", line 31, in <module>

    from utils import *

  File "/Users/mccoy20/uvcdat-app/14-09-16/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/vcs/utils.py", line 6, in <module>

    import boxfill

  File "/Users/mccoy20/uvcdat-app/14-09-16/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/vcs/boxfill.py", line 30, in <module>

    import Canvas

  File "/Users/mccoy20/uvcdat-app/14-09-16/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/vcs/Canvas.py", line 35, in <module>

    from queries import *

  File "/Users/mccoy20/uvcdat-app/14-09-16/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/vcs/queries.py", line 31, in <module>

    import texttable, textorientation, textcombined, template, dv3d

  File "/Users/mccoy20/uvcdat-app/14-09-16/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/vcs/dv3d.py", line 15, in <module>

    from DV3D.ConfigurationFunctions import ConfigManager

  File "/Users/mccoy20/uvcdat-app/14-09-16/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/DV3D/ConfigurationFunctions.py", line 6, in <module>

    import sys, vtk, cdms2, traceback, os, cdtime, cPickle, copy 

  File "/Users/mccoy20/uvcdat-app/14-09-16/Externals/lib/paraview-4.1/site-packages/vtk/__init__.py", line 85, in <module>

    from vtkIONetCDF import *

  File "/Users/mccoy20/uvcdat-app/14-09-16/Externals/lib/paraview-4.1/site-packages/vtk/vtkIONetCDF.py", line 1, in <module>

    from vtkIONetCDFPython import *

ImportError: dlopen(/Users/mccoy20/uvcdat-app/14-09-16/Externals/lib/paraview-4.1/site-packages/vtk/vtkIONetCDFPython.so, 2): Symbol not found: __ZNSt8ios_base4InitD1Ev

  Referenced from: /Users/mccoy20/uvcdat-app/14-09-16/Externals/lib/libnetcdf_c++.4.dylib

  Expected in: flat namespace

 in /Users/mccoy20/uvcdat-app/14-09-16/Externals/lib/libnetcdf_c++.4.dylib

[alliepiper]

I don't see gen_pngs.py in the repo and none of the tests fail in this way. Do you have a script that can reproduce this?

[aashish24]

@dlonie If you can source the runtime script and run regular tests, then probably look into the setup_runtime.sh and see if there is something missing for Mac.

[alliepiper]

The only OS-specific bit in there is:

if [ `uname` = 'Darwin' ] ; then
  export DYLD_FALLBACK_LIBRARY_PATH="${LD_LIBRARY_PATH}"
fi

which shouldn't be causing this sort of problem. I'll need someway to reproduce this to figure out what's going on.

[aashish24]

If that's the case, I think the issue is this then:

ImportError: dlopen(/Users/mccoy20/uvcdat-app/14-09-16/Externals/lib/paraview-4.1/site-packages/vtk/vtkIONetCDFPython.so, 2): Symbol not found: __ZNSt8ios_base4InitD1Ev

Were you able to run tests with the paraview build? Can you post results on the cdash?

[alliepiper]

http://open.cdash.org/viewTest.php?onlyfailed&buildid=3514542

[aashish24]

Looking good. I think the other tests are failing because the ParaView does not has your change to CellToPointData fix. Is that merged into the master yet?

Thanks