hidgenclassifier/DESCRIPTION at master · c7rishi/hidgenclassifier · GitHub

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Package: hidgenclassifier
Title: Functions for Bayesian hierarchical hidden genome classifier
Version: 0.1.3
Author: Saptarshi Chakraborty,
        Axel Martin,
        Zoe Guan,
        Colin B. Begg,
        Ronglai Shen
Maintainer: Saptarshi Chakraborty <chakra.saptarshi@gmail.com>
Description:
    Key functions for Bayesian hidden genome classifiers.
    Includes functions for preprocessing genommic data, fitting and predicting
    from hidden genome classifiers.
License: GPL-3
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Depends:
    R (>= 3.5.0)
biocViews:
Imports:
    Rcpp,
    magrittr,
    data.table,
    Matrix,
    glmnet,
    ggplot2,
    glue,
    methods,
    stats
LinkingTo:
    Rcpp
Suggests:
    tidyverse,
    knitr,
    rmarkdown,
    randomForest,
    ranger,
    e1071,
    liquidSVM,
    caret,
    pROC,
    SomaticSignatures,
    VariantAnnotation,
    IRanges,
    BSgenome.Hsapiens.UCSC.hg19,
    mlrMBO,
    keras,
    lhs,
    ParamHelpers,
    smoof,
    mlr,
    precrec
VignetteBuilder: knitr