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.travis.yml
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21 lines (21 loc) · 741 Bytes
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language: python
python:
- "3.6"
- "3.5"
- "3.4"
- "2.7"
# commands to install dependencies
install:
- python setup.py install
- git clone https://github.com/ewels/MultiQC_TestData.git test_data
- cd test_data
- mkdir empty_dir
# commands to run tests
script:
- python -m unittest discover
- multiqc data
- multiqc data -m fastqc -f -d -dd 1 -i "Forced Report" -b "This command has lots of options" -n custom_fn --no-data-dir
- multiqc data -f -v --flat -e star -x ngi -s -z -c ../multiqc_config_example.yaml
- multiqc -m star -o tests/multiqc_report_dev -t default_dev -k json --file-list data/special_cases/file_list.txt
- multiqc -f empty_dir
- multiqc -f data/modules/gatk/BaseRecalibrator/recal_data.table