bioconda-recipes/recipes/mapsplice/meta.yaml at master · cristhomas/bioconda-recipes · GitHub

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package:
  name: mapsplice
  version: 2.2.0

source:
  fn: MapSplice-v2.2.0.zip
  url: http://protocols.netlab.uky.edu/~zeng/MapSplice-v2.2.0.zip
  md5: 171975d48d2ddcc111a314d926f3527a

  patches:
    - mapsplice.patch
    - samtools.patch

build:
  number: 1
  skip: True # [osx]
  string: "py{{CONDA_PY}}_ncurses{{CONDA_NCURSES}}_{{PKG_BUILDNUM}}"

requirements:
  build:
    - python
    - zlib
    - ncurses {{CONDA_NCURSES}}*

  run:
    - python
    - zlib
    - ncurses {{CONDA_NCURSES}}*

test:

 commands:
   - mapsplice.py -v 2>&1 |grep MapSplice > /dev/null

about:
  license: Custom
  summary: MapSplice is a software for mapping RNA-seq data to reference genome for splice junction discovery that depends only on reference genome, and not on any further annotations.
  license_file: Copyright.txt