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NAMESPACE
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117 lines (116 loc) · 3.2 KB
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# Generated by roxygen2: do not edit by hand
S3method("+",ggcyto_GatingLayout)
S3method("+",ggcyto_GatingSet)
S3method("+",ggcyto_flowSet)
S3method(autoplot,GatingHierarchy)
S3method(autoplot,GatingSet)
S3method(autoplot,GatingSetList)
S3method(autoplot,flowFrame)
S3method(autoplot,flowSet)
S3method(autoplot,ncdfFlowList)
S3method(fortify,GatingSet)
S3method(fortify,GatingSetList)
S3method(fortify,ellipsoidGate)
S3method(fortify,filterList)
S3method(fortify,flowFrame)
S3method(fortify,flowSet)
S3method(fortify,ncdfFlowList)
S3method(fortify,polygonGate)
S3method(fortify,rectangleGate)
S3method(fortify_fs,GatingSet)
S3method(fortify_fs,GatingSetList)
S3method(fortify_fs,default)
S3method(fortify_fs,flowFrame)
S3method(fortify_fs,flowSet)
S3method(geom_gate,character)
S3method(geom_gate,default)
S3method(geom_gate,ellipsoidGate)
S3method(geom_gate,filterList)
S3method(geom_gate,filters)
S3method(geom_gate,filtersList)
S3method(geom_gate,list)
S3method(geom_gate,logical)
S3method(geom_gate,logicalFilterResult)
S3method(geom_gate,polygonGate)
S3method(geom_gate,rectangleGate)
S3method(geom_overlay,character)
S3method(geom_overlay,default)
S3method(geom_overlay,flowFrame)
S3method(geom_overlay,flowSet)
S3method(geom_overlay,ncdfFlowList)
S3method(getFlowFrame,GatingHierarchy)
S3method(getFlowFrame,GatingSet)
S3method(getFlowFrame,GatingSetList)
S3method(getFlowFrame,flowSet)
S3method(getFlowFrame,ncdfFlowList)
S3method(ggcyto,GatingHierarchy)
S3method(ggcyto,GatingSet)
S3method(ggcyto,GatingSetList)
S3method(ggcyto,default)
S3method(ggcyto,flowSet)
S3method(ggcyto,ncdfFlowList)
S3method(plot,ggcyto)
S3method(print,ggcyto)
S3method(print,ggcyto_GatingLayout)
S3method(show,ggcyto)
S3method(show,ggcyto_GatingLayout)
S3method(stat_position,filter)
S3method(stat_position,filterList)
S3method(stat_position,list)
export(.fr2dt)
export(.fs2dt)
export(as.ggplot)
export(axis_x_inverse_trans)
export(axis_y_inverse_trans)
export(compute_stats)
export(flowCore_asinht_trans)
export(fortify_fs)
export(geom_gate)
export(geom_hvline)
export(geom_overlay)
export(geom_stats)
export(getFlowFrame)
export(ggcyto)
export(ggcyto_arrange)
export(ggcyto_par_default)
export(ggcyto_par_set)
export(is.ggcyto)
export(is.ggcyto_flowSet)
export(is.ggcyto_par)
export(labs_cyto)
export(marginalFilter)
export(scale_x_flowCore_fasinh)
export(scale_x_flowJo_biexp)
export(scale_x_flowJo_fasinh)
export(scale_x_logicle)
export(scale_y_flowCore_fasinh)
export(scale_y_flowJo_biexp)
export(scale_y_flowJo_fasinh)
export(scale_y_logicle)
export(stat_position)
exportClasses(ggcyto)
exportClasses(ggcyto_GatingLayout)
exportClasses(ggcyto_GatingSet)
exportClasses(ggcyto_flowSet)
exportMethods("+")
exportMethods(print)
exportMethods(show)
import(data.table)
import(flowCore)
import(flowWorkspace)
import(ggplot2)
import(methods)
import(ncdfFlow)
importFrom(RColorBrewer,brewer.pal)
importFrom(flowCore,arcsinhTransform)
importFrom(flowWorkspace,flowJo_biexp_trans)
importFrom(flowWorkspace,flowJo_fasinh_trans)
importFrom(flowWorkspace,flow_trans)
importFrom(flowWorkspace,logicle_trans)
importFrom(gridExtra,arrangeGrob)
importFrom(plyr,compact)
importFrom(plyr,defaults)
importFrom(plyr,dlply)
importFrom(plyr,empty)
importFrom(plyr,eval.quoted)
importFrom(plyr,name_rows)