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1 parent 8c162c5 commit 83cd243Copy full SHA for 83cd243
1 file changed
biahub/concatenate.py
@@ -338,11 +338,11 @@ def concatenate(
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import zarr
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import zarrs # noqa: F401
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- zarr.config.set({"codec_pipeline.path": "zarrs.ZarrsCodecPipeline"})
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- except ImportError:
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- warnings.warning(
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- "zarrs is not installed. Writing sharded array will be very slow."
+ zarr.config.set(
+ {"codec_pipeline.path": "zarrs.ZarrsCodecPipeline", "threading.max_workers": 1}
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)
+ except ImportError:
+ warnings.warn("zarrs is not installed. Writing sharded array will be very slow.")
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# Logic for creation of zarr and metadata
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output_metadata = {
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