iohub/.github/workflows/pr.yml at b666df9990605b79d98fee7394d5898457119c30 · czbiohub-sf/iohub · GitHub

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# This workflow will install Python dependencies, run tests and lint with a single version of Python
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: PR checks

on:
  pull_request:
    branches:
      - "*"

jobs:
  lint:
    name: Lint
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
      - uses: j178/prek-action@v1
        with:
          extra-args: ''

  tests:
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: ["3.12", "3.13", "3.14"]

    steps:
      - uses: actions/checkout@v4

      - name: Install uv
        uses: astral-sh/setup-uv@v7

      - name: Set up Python ${{ matrix.python-version }}
        run: uv python install ${{ matrix.python-version }}

      - name: Install dependencies
        run: uv sync --group test

      - name: Test with pytest
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
        run: uv run pytest -v --cov=./ --cov-report=xml

  docs:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
      - uses: astral-sh/setup-uv@v7
        with:
          python-version: "3.12"
          enable-cache: true
      - run: uv sync --group doc
      - run: uv run zensical build --clean