Update packaging metadata for 0.2.0 (#288)

* add new version to the docs switcher

* remove redundant value

* add DOI badge
using the 'all versions' DOI that always resolves to the latest version

* update commit hash

* update release date

* fix commit hash

* non-zero return code with no args
pallets/click#1489

* write to stdout
pallets/click#2874

* remove unused import

Author: ziw-liu

CITATION.cff

@@ -15,7 +15,6 @@ authors:
     orcid: 'https://orcid.org/0000-0001-7482-1299'
   - given-names: Ivan
     family-names: Ivanov
-    affiliation: Chan Zuckerberg Biohub San Francisco
     orcid: 'https://orcid.org/0000-0001-6389-0213'
     affiliation: Chan Zuckerberg Biohub San Francisco
   - given-names: Jordão
@@ -56,6 +55,6 @@ keywords:
   - bioimaging
   - ndimensional-arrays
 license: BSD-3-Clause
-commit: a4d43a2a8cd8d4abce00e475f9f1699d451eba9f
-version: 0.1.0
-date-released: '2024-02-14'
+commit: dc704aa5506a84fdb2b538834ac181b691e70766
+version: 0.2.0
+date-released: '2025-04-22'

README.md

@@ -2,6 +2,7 @@
 
 [![PyPI - Python version](https://img.shields.io/pypi/pyversions/iohub)](https://pypi.org/project/iohub)
 [![PyPI - iohub version](https://img.shields.io/pypi/v/iohub.svg)](https://pypi.org/project/iohub)
+[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.15022067.svg)](https://doi.org/10.5281/zenodo.15022067)
 [![Docs deployment](https://github.com/czbiohub-sf/iohub/actions/workflows/docs.yml/badge.svg)](https://czbiohub-sf.github.io/iohub)
 
 N-dimensional bioimaging produces data and metadata in various formats,

docs/source/_static/switcher.json

@@ -6,5 +6,9 @@
     {
         "version": "v0.1.0",
         "url": "/iohub/v0.1.0/index.html"
+    },
+    {
+        "version": "v0.2.0",
+        "url": "/iohub/v0.2.0/index.html"
     }
-]
+]

iohub/reader.py

@@ -1,7 +1,6 @@
 from __future__ import annotations
 
 import logging
-import sys
 import warnings
 from pathlib import Path
 from typing import TYPE_CHECKING, Literal
@@ -206,7 +205,7 @@ def print_info(path: StrOrBytesPath, verbose=False):
         else:
             reader = read_images(path, data_type=fmt)
     except (ValueError, RuntimeError):
-        print("Error: No compatible dataset is found.", file=sys.stderr)
+        print("Error: No compatible dataset is found.")
         return
     fmt_msg = f"Format:\t\t\t {fmt}"
     if extra_info:

tests/cli/test_cli.py

@@ -34,7 +34,7 @@ def pytest_generate_tests(metafunc):
 def test_cli_entry():
     runner = CliRunner()
     result = runner.invoke(cli)
-    assert result.exit_code == 0
+    assert result.exit_code == 2
     assert "Usage" in result.output