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VTKPlots.py
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1863 lines (1708 loc) · 67.3 KB
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import animate_helper
import warnings
import vtk
import vcs
import vcs2vtk
import numpy
from vtk.util import numpy_support as VN
import meshfill,boxfill,isofill,isoline
import os, traceback, sys
import cdms2
import DV3D
import MV2
import cdtime
import inspect
import VTKAnimate
def smooth(x,beta,window_len=11):
""" kaiser window smoothing """
# extending the data at beginning and at the end
# to apply the window at the borders
s = numpy.r_[x[window_len-1:0:-1],x,x[-1:-window_len:-1]]
w = numpy.kaiser(window_len,beta)
y = numpy.convolve(w/w.sum(),s,mode='valid')
return y[(window_len/2):-(window_len/2)]
class VCSInteractorStyle(vtk.vtkInteractorStyleUser):
def __init__(self,parent):
self.AddObserver("LeftButtonPressEvent", parent.leftButtonPressEvent )
self.AddObserver("LeftButtonReleaseEvent", parent.leftButtonReleaseEvent )
self.AddObserver( "ModifiedEvent", parent.configureEvent )
self.AddObserver( "ConfigureEvent", parent.configureEvent )
if sys.platform == "darwin":
self.AddObserver( "RenderEvent", parent.renderEvent )
class VTKVCSBackend(object):
def __init__(self,canvas,renWin=None, debug=False,bg=None):
self._lastSize = None
self.canvas = canvas
self.renWin = renWin
self.debug = debug
self.bg = bg
self.type = "vtk"
self.plotApps = {}
self.plotRenderers = set()
self.logoRenderer = None
self.logoRepresentation = None
self.renderer = None
self._renderers = {}
self._plot_keywords = ['renderer','vtk_backend_grid','vtk_backend_geo']
self.numberOfPlotCalls = 0
self.renderWindowSize=None
if renWin is not None:
self.renWin = renWin
if renWin.GetInteractor() is None and self.bg is False:
self.createDefaultInteractor()
if sys.platform == "darwin":
self.reRender = False
self.clickRenderer = None
self.oldCursor = None
def setAnimationStepper( self, stepper ):
for plot in self.plotApps.values():
plot.setAnimationStepper( stepper )
def interact(self,*args,**kargs):
if self.renWin is None:
warnings.warn("Cannot interact if you did not open the canvas yet")
return
interactor = self.renWin.GetInteractor()
## Mac seems to handle events a bit differently
## Need to add observers on renWin
## Linux is fine w/o it so no need to do it
if sys.platform == "darwin":
self.renWin.AddObserver( "RenderEvent", self.renderEvent )
self.renWin.AddObserver("LeftButtonPressEvent", self.leftButtonPressEvent )
self.renWin.AddObserver("LeftButtonReleaseEvent", self.leftButtonReleaseEvent )
self.renWin.AddObserver( "ModifiedEvent", self.configureEvent )
self.renWin.AddObserver( "ConfigureEvent", self.configureEvent )
self.renWin.AddObserver( "EndEvent",self.endEvent)
if interactor is None:
warnings.warn("Cannot start interaction. Blank plot?")
return
warnings.warn("Press 'Q' to exit interactive mode and continue script execution")
interactor.Start()
def endEvent(self,obj,event):
if self.renWin is not None:
if self.reRender:
self.reRender = False
#self._lastSize = None
self.renWin.Render()
def renderEvent(self,caller,evt):
renwin = self.renWin if (caller == None) else caller
window_size = renwin.GetSize()
if ( window_size <> self.renderWindowSize ):
self.configureEvent(caller,evt)
self.renderWindowSize = window_size
def leftButtonPressEvent(self,obj,event):
xy = self.renWin.GetInteractor().GetEventPosition()
sz = self.renWin.GetSize()
x = float(xy[0])/sz[0]
y = float(xy[1])/sz[1]
st = ""
for dnm in self.canvas.display_names:
d=vcs.elements["display"][dnm]
if d.array[0] is None:
continue
t=vcs.elements["template"][d.template]
gm = vcs.elements[d.g_type][d.g_name]
if t.data.x1<=x<=t.data.x2 and t.data.y1<=y<=t.data.y2:
## Ok we clicked within template
if numpy.allclose(gm.datawc_x1,1.e20):
x1 = d.array[0].getAxis(-1)[0]
else:
x1 = gm.datawc_x1
if numpy.allclose(gm.datawc_x2,1.e20):
x2 = d.array[0].getAxis(-1)[-1]
else:
x2 = gm.datawc_x2
if numpy.allclose(gm.datawc_y1,1.e20):
y1 = d.array[0].getAxis(-2)[0]
else:
y1 = gm.datawc_y1
if numpy.allclose(gm.datawc_y2,1.e20):
y2 = d.array[0].getAxis(-2)[-1]
else:
y2 = gm.datawc_y2
X = (x-t.data.x1)/(t.data.x2-t.data.x1)*(x2-x1)+x1
Y = (y-t.data.y1)/(t.data.y2-t.data.y1)*(y2-y1)+y1
# Ok we now have the X/Y values we need to figure out the indices
try:
I = d.array[0].getAxis(-1).mapInterval((X,X,'cob'))[0]
try:
J = d.array[0].getAxis(-2).mapInterval((Y,Y,'cob'))[0]
# Values at that point
V = d.array[0][...,J,I]
except:
V = d.array[0][...,I]
if isinstance(V,numpy.ndarray):
V=V.flat[0]
try:
st+="Var: %s\nX[%i] = %g\nY[%i] = %g\nValue: %g" % (d.array[0].id,I,X,J,Y,V)
except:
st+="Var: %s\nX = %g\nY[%i] = %g\nValue: %g" % (d.array[0].id,X,I,Y,V)
except:
st+="Var: %s\nX=%g\nY=%g\nValue = N/A" % (d.array[0].id,X,Y)
ren = vtk.vtkRenderer()
ren.SetBackground(.96,.96,.86)
ren.SetViewport(x,y,min(x+.2,1.),min(y+.2,1))
ren.SetLayer(self.renWin.GetNumberOfLayers()-1)
a=vtk.vtkTextActor()
a.SetInput(st)
p=a.GetProperty()
p.SetColor(0,0,0)
bb = [0,0,0,0]
a.GetBoundingBox(ren,bb)
ps=vtk.vtkPlaneSource()
ps.SetCenter(bb[0],bb[2],0.)
ps.SetPoint1(bb[1],bb[2],0.)
ps.SetPoint2(bb[0],bb[3],0.)
ps.Update()
m2d=vtk.vtkPolyDataMapper2D()
m2d.SetInputConnection(ps.GetOutputPort())
a2d=vtk.vtkActor2D()
a2d.SetMapper(m2d)
a2d.GetProperty().SetColor(.93,.91,.67)
ren.AddActor(a2d)
ren.AddActor(a)
ren.ResetCamera()
self.clickRenderer= ren
self.renWin.AddRenderer(ren)
self.renWin.Render()
def leftButtonReleaseEvent(self,obj,event):
if self.clickRenderer is not None:
self.clickRenderer.RemoveAllViewProps()
self.renWin.RemoveRenderer(self.clickRenderer)
self.renWin.Render()
def configureEvent(self,obj,ev):
cursor = self.renWin.GetCurrentCursor()
if sys.platform == "darwin" and ev == "ModifiedEvent" and cursor != self.oldCursor:
self.oldCursor = cursor
return
if self.get3DPlot() is not None:
return
sz = self.renWin.GetSize()
if self._lastSize == sz:
# We really only care about resize event
# this is mainly to avoid segfault vwith Vistraisl which does
# not catch configure Events but only modifiedEvents....
if self.renWin is not None and sys.platform == "darwin":
self.renWin.Render()
return
interactor = self.renWin.GetInteractor()
self._lastSize = sz
plots_args = []
key_args =[]
for dnm in self.canvas.display_names:
d=vcs.elements["display"][dnm]
parg = []
for a in d.array:
if a is not None:
parg.append(a)
parg.append(d._template_origin)
parg.append(d.g_type)
parg.append(d.g_name)
plots_args.append(parg)
if d.ratio is not None:
key_args.append({"ratio":d.ratio})
else:
key_args.append({})
# Have to pull out the UI layer so it doesn't get borked by the clear
self.hideGUI()
self.canvas.clear()
for i, pargs in enumerate(plots_args):
self.canvas.plot(*pargs,**key_args[i])
if self.canvas.animate.created():
self.canvas.animate.draw_frame()
self.showGUI()
if self.renWin.GetSize()!=(0,0):
self.scaleLogo()
if self.renWin is not None and sys.platform == "darwin":
self.renWin.Render()
if sys.platform == "darwin":
## On mac somehow we need to issue an extra Render after resize
# If ev is None, then the update() was called, and we only need to render once.
if ev is not None:
self.reRender = True
def clear(self):
if self.renWin is None: #Nothing to clear
return
renderers = self.renWin.GetRenderers()
renderers.InitTraversal()
ren = renderers.GetNextItem()
hasValidRenderer = True if ren is not None else False
while ren is not None:
if not ren in self.plotRenderers:
ren.RemoveAllViewProps()
if not ren.GetLayer()==0:
self.renWin.RemoveRenderer(ren)
else:
#Update background color
r,g,b = [c / 255. for c in self.canvas.backgroundcolor]
ren.SetBackground(r,g,b)
ren = renderers.GetNextItem()
if hasValidRenderer and self.renWin.IsDrawable():
self.renWin.Render()
self.numberOfPlotCalls = 0
self.logoRenderer = None
self.createLogo()
self._renderers = {}
def createDefaultInteractor( self, ren=None ):
defaultInteractor = self.renWin.GetInteractor()
if defaultInteractor is None:
defaultInteractor = vtk.vtkRenderWindowInteractor()
self.vcsInteractorStyle = VCSInteractorStyle(self)
if ren:
self.vcsInteractorStyle.SetCurrentRenderer( ren )
defaultInteractor.SetInteractorStyle( self.vcsInteractorStyle )
defaultInteractor.SetRenderWindow(self.renWin)
self.vcsInteractorStyle.On()
def createRenWin(self,*args,**kargs):
if self.renWin is None:
# Create the usual rendering stuff.
self.renWin = vtk.vtkRenderWindow()
self.renWin.SetWindowName("VCS Canvas %i" % self.canvas._canvas_id)
self.renWin.SetAlphaBitPlanes(1)
## turning on Stencil for Labels on iso plots
self.renWin.SetStencilCapable(1)
## turning off antialiasing by default
## mostly so that pngs are same accross platforms
self.renWin.SetMultiSamples(0)
self.initialSize()
if self.renderer == None:
self.renderer = self.createRenderer()
if self.bg is False:
self.createDefaultInteractor(self.renderer)
self.renWin.AddRenderer(self.renderer)
def createRenderer(self, *args, **kargs):
# For now always use the canvas background
ren = vtk.vtkRenderer()
r,g,b = self.canvas.backgroundcolor
ren.SetBackground(r/255., g/255., b/255.)
return ren
def update(self, *args, **kargs):
self._lastSize=-1
if self.renWin:
self.configureEvent(None,None)
def canvasinfo(self):
if self.renWin is None:
mapstate = False
height = self.canvas.bgY
width = self.canvas.bgX
depth = None
x=0
y=0
else:
try: #mac but not linux
mapstate = self.renWin.GetWindowCreated()
except:
mapstate = True
width, height = self.renWin.GetSize()
depth=self.renWin.GetDepthBufferSize()
try: #mac not linux
x,y = self.renWin.GetPosition()
except:
x,y = 0,0
info = {
"mapstate":mapstate,
"height":height,
"width":width,
"depth":depth,
"x":x,
"y":y,
}
return info
def orientation(self,*args,**kargs):
if self.renWin is None:
return "landscape"
w,h = self.renWin.GetSize()
if w>h:
return "landscape"
else:
return "portrait"
def portrait(self,W,H,x,y,clear):
if clear:
self.clear()
if self.renWin is None:
if W!=-99:
self.canvas.bgX = W
self.canvas.bgY = H
else:
W = self.canvas.bgX
self.canvas.bgX = self.canvas.bgY
self.canvas.bgY = W
else:
self.renWin.SetSize(W,H)
def initialSize(self):
#screenSize = self.renWin.GetScreenSize()
self.renWin.SetSize(self.canvas.bgX,self.canvas.bgY)
def open(self):
self.createRenWin( open=True )
def close(self):
if self.renWin is None:
return
self.clear()
self.renWin.Finalize()
self.renWin = None
def geometry(self,x,y,*args):
self.renWin.SetSize(x,y)
def flush(self):
if self.renWin is not None:
self.renWin.Render()
def plot(self,data1,data2,template,gtype,gname,bg,*args,**kargs):
self.numberOfPlotCalls+=1
## these are keyargs that can be reused later by the backend.
returned = {}
if self.bg is None:
if bg:
self.bg= True
else:
self.bg= False
self.createRenWin(**kargs)
if self.bg:
self.renWin.SetOffScreenRendering(True)
self.renWin.SetSize(self.canvas.bgX,self.canvas.bgY)
self.cell_coordinates=kargs.get( 'cell_coordinates', None )
self.canvas.initLogoDrawing()
if gtype == "text":
tt,to = gname.split(":::")
tt = vcs.elements["texttable"][tt]
to = vcs.elements["textorientation"][to]
gm=tt
else:
gm = vcs.elements[gtype][gname]
tpl = vcs.elements["template"][template]
if kargs.get("renderer",None) is None:
if ( gtype in ["3d_scalar", "3d_dual_scalar", "3d_vector"] ) and (self.renderer <> None):
ren = self.renderer
else:
#ren = self.createRenderer()
#if not (vcs.issecondaryobject(gm) and gm.priority==0):
# self.setLayer(ren,tpl.data.priority)
# self.renderer = ren
# self.renWin.AddRenderer(ren)
pass
#ren.SetPreserveDepthBuffer(True)
else:
ren = kargs["renderer"]
vtk_backend_grid = kargs.get("vtk_backend_grid",None)
vtk_backend_geo = kargs.get("vtk_backend_geo",None)
if gtype in ["boxfill","meshfill","isofill","isoline"]:
returned.update(self.plot2D(data1,data2,tpl,gm,vtk_backend_grid=vtk_backend_grid,vtk_backend_geo=vtk_backend_geo))
elif gtype in ["3d_scalar", "3d_dual_scalar", "3d_vector"]:
cdms_file = kargs.get( 'cdmsfile', None )
cdms_var = kargs.get( 'cdmsvar', None )
if not cdms_var is None:
raise Exception()
if not cdms_file is None:
gm.addPlotAttribute( 'file', cdms_file )
gm.addPlotAttribute( 'filename', cdms_file )
gm.addPlotAttribute( 'url', cdms_file )
returned.update(self.plot3D(data1,data2,tpl,gm,ren,**kargs))
elif gtype in ["text"]:
if tt.priority!=0:
#if not (None,None,None) in self._renderers.keys():
ren = self.createRenderer()
self.renWin.AddRenderer(ren)
self.setLayer(ren,1)
# self._renderers[(None,None,None)]=ren
#else:
# ren = self._renderers[(None,None,None)]
returned["vtk_backend_text_actors"] = vcs2vtk.genTextActor(ren,to=to,tt=tt)
self.setLayer(ren,tt.priority)
elif gtype=="line":
if gm.priority!=0:
actors = vcs2vtk.prepLine(self.renWin,gm)
returned["vtk_backend_line_actors"]=actors
for act,geo in actors:
ren = self.fitToViewport(act,gm.viewport,wc=gm.worldcoordinate,geo=geo,priority=gm.priority)
elif gtype=="marker":
if gm.priority!=0:
actors = vcs2vtk.prepMarker(self.renWin,gm)
returned["vtk_backend_marker_actors"]=actors
for g,gs,pd,act,geo in actors:
ren = self.fitToViewport(act,gm.viewport,wc=gm.worldcoordinate,geo=geo,priority=gm.priority)
if pd is None and act.GetUserTransform():
vcs2vtk.scaleMarkerGlyph(g, gs, pd, act)
elif gtype=="fillarea":
if gm.priority!=0:
actors = vcs2vtk.prepFillarea(self.renWin,gm)
returned["vtk_backend_fillarea_actors"]=actors
for act,geo in actors:
ren = self.fitToViewport(act,gm.viewport,wc=gm.worldcoordinate,geo=geo,priority=gm.priority)
elif gtype=="1d":
#self.renWin.AddRenderer(ren)
returned.update(self.plot1D(data1,data2,tpl,gm))
elif gtype=="vector":
returned.update(self.plotVector(data1,data2,tpl,gm,vtk_backend_grid=vtk_backend_grid,vtk_backend_geo=vtk_backend_geo))
else:
raise Exception,"Graphic type: '%s' not re-implemented yet" % gtype
self.scaleLogo()
if not kargs.get("donotstoredisplay",False):
self.renWin.Render()
return returned
def plot1D(self,data1,data2,tmpl,gm):
Y = self.trimData1D(data1)
if data2 is None:
X=Y.getAxis(0)
else:
X=Y
data1._yname = data2.id
Y=self.trimData1D(data2)
if gm.flip:
tmp = Y
Y = X
X = tmp
if gm.smooth is not None:
Y = smooth(Y,gm.smooth)
l = self.canvas.createline()
Xs = X[:].tolist()
Ys = Y[:].tolist()
xs = []
ys = []
prev = None
for i,v in enumerate(Ys):
if v is not None and Xs[i] is not None: # Valid data
if prev is None:
prev=[]
prev2 = []
prev.append(Xs[i])
prev2.append(v)
else:
if prev is not None:
xs.append(prev)
ys.append(prev2)
prev = None
if prev is not None:
xs.append(prev)
ys.append(prev2)
l._x = xs
l._y = ys
l.color=gm.linecolor
if gm.linewidth>0:
l.width = gm.linewidth
else:
l.priority=0
l.type = gm.line
l._viewport = [tmpl.data.x1,tmpl.data.x2,tmpl.data.y1,tmpl.data.y2]
# Also need to make sure it fills the whole space
x1,x2,y1,y2 = vcs.utils.getworldcoordinates(gm,X,Y)
if numpy.allclose(y1,y2):
y1-=.0001
y2+=.0001
if numpy.allclose(x1,x2):
x1-=.0001
x2+=.0001
l._worldcoordinate = [x1,x2,y1,y2]
if gm.marker is not None:
m=self.canvas.createmarker()
m.type = gm.marker
m.color = gm.markercolor
if gm.markersize>0:
m.size = gm.markersize
else:
m.priority=0
m._x = l.x
m._y = l.y
m._viewport=l.viewport
m._worldcoordinate = l.worldcoordinate
if not (Y[:].min()>max(y1,y2) or Y[:].max()<min(y1,y2) \
or X[:].min()>max(x1,x2) or X[:].max()<min(x1,x2)):
if l.priority>0:
self.canvas.plot(l,donotstoredisplay=True)
if gm.marker is not None and m.priority>0:
self.canvas.plot(m,donotstoredisplay=True)
ren2 = self.createRenderer()
self.renWin.AddRenderer(ren2)
tmpl.plot(self.canvas,data1,gm,bg=self.bg,renderer=ren2,X=X,Y=Y)
if hasattr(data1,"_yname"):
del(data1._yname)
del(vcs.elements["line"][l.name])
if gm.marker is not None:
del(vcs.elements["marker"][m.name])
if tmpl.legend.priority>0:
legd = self.canvas.createline()
legd.x = [tmpl.legend.x1, tmpl.legend.x2]
legd.y = [tmpl.legend.y1, tmpl.legend.y1]
legd.color = l.color
legd.width = l.width
legd.type = l.type
t=self.canvas.createtext(To_source=tmpl.legend.textorientation,Tt_source=tmpl.legend.texttable)
t.x=tmpl.legend.x2
t.y=tmpl.legend.y2
t.string=data1.id
self.canvas.plot(t,donotstoredisplay=True)
sp = t.name.split(":::")
del(vcs.elements["texttable"][sp[0]])
del(vcs.elements["textorientation"][sp[1]])
del(vcs.elements["textcombined"][t.name])
self.canvas.plot(legd,donotstoredisplay=True)
del(vcs.elements["line"][legd.name])
return {}
def setLayer(self,renderer,priority):
n = self.numberOfPlotCalls + (priority-1)*200 + 1
nMax = max(self.renWin.GetNumberOfLayers(),n+1)
self.renWin.SetNumberOfLayers(nMax)
renderer.SetLayer(n)
def plot3D(self,data1,data2,tmpl,gm,ren,**kargs):
from DV3D.Application import DV3DApp
requiresFileVariable = True
self.canvas.drawLogo = False
if ( data1 is None ) or ( requiresFileVariable and not ( isinstance(data1, cdms2.fvariable.FileVariable ) or isinstance(data1, cdms2.tvariable.TransientVariable ) ) ):
traceback.print_stack()
raise Exception, "Error, must pass a cdms2 variable object as the first input to the dv3d gm ( found '%s')" % ( data1.__class__.__name__ )
g = self.plotApps.get( gm, None )
if g == None:
g = DV3DApp( self.canvas, self.cell_coordinates )
n_overview_points = 500000
grid_coords = ( None, None, None, None )
var_proc_op = None
interface = None
roi = None # ( 0, 0, 50, 50 )
g.gminit( data1, data2, roi=roi, axes=gm.axes, n_overview_points=n_overview_points, n_cores=gm.NumCores, renwin=ren.GetRenderWindow(), plot_attributes=gm.getPlotAttributes(), gmname=gm.g_name, cm=gm.cfgManager, **kargs ) #, plot_type = PlotType.List )
self.plotApps[ gm ] = g
self.plotRenderers.add( g.plot.renderer )
else:
g.update( tmpl )
return {}
def onClosing( self, cell ):
for plot in self.plotApps.values():
if hasattr( plot, 'onClosing' ):
plot.onClosing( cell )
def plotVector(self,data1,data2,tmpl,gm,vtk_backend_grid=None,vtk_backend_geo=None):
#Preserve time and z axis for plotting these inof in rendertemplate
returned = {}
taxis = data1.getTime()
if data1.ndim>2:
zaxis = data1.getAxis(-3)
else:
zaxis = None
data1 = self.trimData2D(data1) # Ok get3 only the last 2 dims
data2 = self.trimData2D(data2)
gridGenDict = vcs2vtk.genGridOnPoints(data1,gm,deep=False,grid=vtk_backend_grid,geo=vtk_backend_geo)
for k in ['vtk_backend_grid','xm','xM','ym','yM','continents','wrap','geo']:
exec("%s = gridGenDict['%s']" % (k,k))
returned["vtk_backend_grid"]=vtk_backend_grid
returned["vtk_backend_geo"]=geo
missingMapper = vcs2vtk.putMaskOnVTKGrid(data1,vtk_backend_grid,None,False,deep=False)
#None/False are for color and cellData (sent to vcs2vtk.putMaskOnVTKGrid)
returned["vtk_backend_missing_mapper"]=missingMapper,None,False
w=vcs2vtk.generateVectorArray(data1,data2,vtk_backend_grid)
vtk_backend_grid.GetPointData().AddArray(w)
## Vector attempt
l = gm.line
if l is None:
l = "default"
try:
l = vcs.getline(l)
lwidth = l.width[0]
lcolor = l.color[0]
lstyle = l.type[0]
except:
lstyle = "solid"
lwidth = 1.
lcolor = 0
if gm.linewidth is not None:
lwidth = gm.linewidth
if gm.linecolor is not None:
lcolor = gm.linecolor
vtk_backend_grid = vcs2vtk.stripGrid(vtk_backend_grid)
arrow = vtk.vtkGlyphSource2D()
arrow.SetGlyphTypeToArrow()
arrow.FilledOff()
glyphFilter = vtk.vtkGlyph2D()
glyphFilter.SetSourceConnection(arrow.GetOutputPort())
glyphFilter.SetVectorModeToUseVector()
# Rotate arrows to match vector data:
glyphFilter.OrientOn()
# Scale to vector magnitude:
glyphFilter.SetScaleModeToScaleByVector()
# These are some unfortunately named methods. It does *not* clamp the scale
# range to [min, max], but rather remaps the range [min, max]-->[0,1]. Bump
# up min so that near-zero vectors will not be rendered, as these tend to
# come out randomly oriented.
glyphFilter.ClampingOn()
glyphFilter.SetRange(0.01, 1.0)
glyphFilter.SetInputArrayToProcess(1,0,0,0,"vectors")
glyphFilter.SetScaleFactor(2.*gm.scale)
glyphFilter.SetInputData(vtk_backend_grid)
mapper = vtk.vtkPolyDataMapper()
mapper.SetInputConnection(glyphFilter.GetOutputPort())
act = vtk.vtkActor()
act.SetMapper(mapper)
try:
cmap = vcs.elements["colormap"][cmap]
except:
cmap = vcs.elements["colormap"][self.canvas.getcolormapname()]
r,g,b = cmap.index[lcolor]
act.GetProperty().SetColor(r/100.,g/100.,b/100.)
x1,x2,y1,y2 = vcs.utils.getworldcoordinates(gm,data1.getAxis(-1),data1.getAxis(-2))
act = vcs2vtk.doWrap(act,[x1,x2,y1,y2],wrap)
ren = self.fitToViewport(act,[tmpl.data.x1,tmpl.data.x2,tmpl.data.y1,tmpl.data.y2],[x1,x2,y1,y2],priority=tmpl.data.priority)
returned.update(self.renderTemplate(tmpl,data1,gm,taxis,zaxis))
if self.canvas._continents is None:
continents = False
if continents:
projection = vcs.elements["projection"][gm.projection]
self.plotContinents(x1,x2,y1,y2,projection,wrap,tmpl)
returned["vtk_backend_actors"] = [[act,[x1,x2,y1,y2]],]
returned["vtk_backend_glyphfilters"]=[glyphFilter,]
returned["vtk_backend_luts"]=[[None,None],]
return returned
def plot2D(self,data1,data2,tmpl,gm,vtk_backend_grid=None,vtk_backend_geo=None):
#Preserve time and z axis for plotting these inof in rendertemplate
returned = {}
t = data1.getTime()
if data1.ndim>2:
z = data1.getAxis(-3)
else:
z = None
wmn,wmx = vcs.minmax(data1)
data1 = self.trimData2D(data1) # Ok get3 only the last 2 dims
if gm.g_name!="Gfm":
data2 = self.trimData2D(data2)
if isinstance(gm,(vcs.isofill.Gfi,vcs.isoline.Gi)):
gridGenDict = vcs2vtk.genGridOnPoints(data1,gm,deep=False,grid=vtk_backend_grid,geo=vtk_backend_geo)
gridGenDict["cellData"]=False
else:
gridGenDict = vcs2vtk.genGrid(data1,data2,gm,deep=False,grid=vtk_backend_grid,geo=vtk_backend_geo)
for k in ['vtk_backend_grid','xm','xM','ym','yM','continents','wrap','geo','cellData']:
exec("%s = gridGenDict['%s']" % (k,k))
returned["vtk_backend_grid"]=vtk_backend_grid
returned["vtk_backend_geo"]=geo
returned["vtk_backend_wrap"]=wrap
#Now applies the actual data on each cell
if isinstance(gm,boxfill.Gfb) and gm.boxfill_type=="log10":
data1=numpy.ma.log10(data1)
data = vcs2vtk.numpy_to_vtk_wrapper(data1.filled(0.).flat, deep=False)
if cellData:
vtk_backend_grid.GetCellData().SetScalars(data)
else:
vtk_backend_grid.GetPointData().SetScalars(data)
try:
cmap = vcs.elements["colormap"][cmap]
except:
cmap = vcs.elements["colormap"][self.canvas.getcolormapname()]
color = getattr(gm,"missing",None)
if color is not None:
color = cmap.index[color]
missingMapper = vcs2vtk.putMaskOnVTKGrid(data1,vtk_backend_grid,color,cellData,deep=False)
returned["vtk_backend_missing_mapper"]=missingMapper,color,cellData
lut = vtk.vtkLookupTable()
mn,mx=vcs.minmax(data1)
#Ok now we have grid and data let's use the mapper
mapper = vtk.vtkPolyDataMapper()
legend = None
if isinstance(gm,(meshfill.Gfm,boxfill.Gfb)):
geoFilter = vtk.vtkDataSetSurfaceFilter()
if cellData:
p2c = vtk.vtkPointDataToCellData()
p2c.SetInputData(vtk_backend_grid)
geoFilter.SetInputConnection(p2c.GetOutputPort())
else:
geoFilter.SetInputData(vtk_backend_grid)
geoFilter.Update()
if isinstance(gm,(isofill.Gfi,isoline.Gi,meshfill.Gfm)) or \
(isinstance(gm,boxfill.Gfb) and gm.boxfill_type=="custom"):
#Now this filter seems to create the good polydata
sFilter = vtk.vtkDataSetSurfaceFilter()
if cellData:
# Sets data to point instead of just cells
c2p = vtk.vtkCellDataToPointData()
c2p.SetInputData(vtk_backend_grid)
c2p.Update()
#For contouring duplicate points seem to confuse it
if vtk_backend_grid.IsA("vtkUntructuredGrid"):
cln = vtk.vtkCleanUnstructuredGrid()
cln.SetInputConnection(c2p.GetOutputPort())
sFilter.SetInputConnection(cln.GetOutputPort())
else:
sFilter.SetInputConnection(c2p.GetOutputPort())
else:
sFilter.SetInputData(vtk_backend_grid)
sFilter.Update()
returned["vtk_backend_filter"]=sFilter
if isinstance(gm,isoline.Gi):
cot = vtk.vtkContourFilter()
if cellData:
cot.SetInputData(sFilter.GetOutput())
else:
cot.SetInputData(vtk_backend_grid)
levs = gm.levels
if (isinstance(gm,isoline.Gi) and numpy.allclose( levs[0],[0.,1.e20])) or numpy.allclose(levs,1.e20):
levs = vcs.mkscale(mn,mx)
if len(levs)==1: # constant value ?
levs = [levs[0],levs[0]+.00001]
Ncolors = len(levs)
if isinstance(gm,(isofill.Gfi,meshfill.Gfm)):
levs2 = vcs.mkscale(mn,mx)
if len(levs2)==1: # constant value ?
levs2 = [levs2[0],levs2[0]+.00001]
levs=[]
for i in range(len(levs2)-1):
levs.append([levs2[i],levs2[i+1]])
else:
if isinstance(gm.levels[0],(list,tuple)):
if isinstance(gm,isoline.Gi):
levs = [x[0] for x in gm.levels]
else:
levs = gm.levels
else:
levs = []
levs2=gm.levels
if numpy.allclose(levs2[0],1.e20):
levs2[0]=-1.e20
for i in range(len(levs2)-1):
levs.append([levs2[i],levs2[i+1]])
if isinstance(gm,isoline.Gi):
levs = levs2
Nlevs=len(levs)
Ncolors = Nlevs
## Figure out colors
if isinstance(gm,boxfill.Gfb):
cols = gm.fillareacolors
if cols is None:
cols = vcs.getcolors(levs2,split=0)
elif isinstance(gm,(isofill.Gfi,meshfill.Gfm)):
cols = gm.fillareacolors
if cols==[1,]:
cols = vcs.getcolors(levs2,split=0)
if isinstance(cols,(int,float)):
cols=[cols,]
elif isinstance(gm,isoline.Gi):
cols = gm.linecolors
if isinstance(gm, isoline.Gi):
cot.SetNumberOfContours(Nlevs)
if levs[0]==1.e20:
levs[0]=-1.e20
for i in range(Nlevs):
cot.SetValue(i,levs[i])
cot.SetValue(Nlevs,levs[-1])
cot.Update()
mappers = []
if gm.label=="y":
mapper = vtk.vtkLabeledContourMapper()
else:
mapper = vtk.vtkPolyDataMapper()
lut = vtk.vtkLookupTable()
lut.SetNumberOfTableValues(1)
lut.SetTableValue(0, 0, 0, 0)
if gm.label=="y":
mapper.GetPolyDataMapper().SetLookupTable(lut)
mapper.SetLabelVisibility(1)
else:
mapper.SetLookupTable(lut)
# Create text properties.
if gm.label=="y":
if gm.text or gm.textcolors:
colorOverrides = gm.textcolors if gm.textcolors else [None] * len(gm.text)
texts = gm.text if gm.text else [None] * len(gm.textcolors)
while len(texts)<Nlevs:
texts.append(texts[-1])
while len(colorOverrides)<Nlevs:
colorOverrides.append(colorOverrides[-1])
tprops = vtk.vtkTextPropertyCollection()
for tc,colorOverride in zip(texts, colorOverrides):
if vcs.queries.istextcombined(tc):
tt,to = tuple(tc.name.split(":::"))
elif tc is None:
tt="default"
to="default"
elif vcs.queries.istexttable(tc):
tt=tc.name
to="default"
elif vcs.queries.istextorientation(tc):
to=tc.name
tt="default"
if colorOverride is not None:
tt=vcs.createtexttable(None,tt)
tt.color = colorOverride
tt=tt.name
tprop = vtk.vtkTextProperty()
vcs2vtk.prepTextProperty(tprop, self.renWin.GetSize(), to, tt)
tprops.AddItem(tprop)
if colorOverride is not None:
del(vcs.elements["texttable"][tt])
mapper.SetTextProperties(tprops)
else:
# No text properties specified. Use the default:
tprop = vtk.vtkTextProperty()
vcs2vtk.prepTextProperty(tprop, self.renWin.GetSize())
mapper.SetTextProperty(tprop)
stripper = vtk.vtkStripper()
stripper.SetInputConnection(cot.GetOutputPort())
mapper.SetInputConnection(stripper.GetOutputPort())
stripper.Update()
mappers.append([mapper,])
returned["vtk_backend_contours"]=[cot,]
else:
mappers = []
LEVS = []
INDX = []
COLS = []
indices = gm.fillareaindices
if indices is None:
indices=[1,]
while len(indices)<len(cols):
indices.append(indices[-1])
for i,l in enumerate(levs):
if i==0:
C = [cols[i],]
if numpy.allclose(levs[0][0],-1.e20):
## ok it's an extension arrow
L=[mn-1.,levs[0][1]]
else:
L = list(levs[i])
I = [indices[i],]
else:
if l[0] == L[-1] and I[-1]==indices[i]:
# Ok same type lets keep going
if numpy.allclose(l[1],1.e20):
L.append(mx+1.)
else:
L.append(l[1])
C.append(cols[i])
else: # ok we need new contouring
LEVS.append(L)
COLS.append(C)
INDX.append(I)
C = [cols[i],]
L = levs[i]
I = [indices[i],]
LEVS.append(L)
COLS.append(C)
INDX.append(I)
luts=[]
cots=[]
geos =[]
for i,l in enumerate(LEVS):
# Ok here we are trying to group together levels can be, a join will happen if:
# next set of levels contnues where one left off AND pattern is identical
if isinstance(gm,isofill.Gfi):
mapper = vtk.vtkPolyDataMapper()
lut = vtk.vtkLookupTable()
cot = vtk.vtkBandedPolyDataContourFilter()
cot.ClippingOn()
cot.SetInputData(sFilter.GetOutput())
cot.SetNumberOfContours(len(l))
cot.SetClipTolerance(0.)
for j,v in enumerate(l):
cot.SetValue(j,v)
#cot.SetScalarModeToIndex()
cot.Update()
cots.append(cot)
mapper.SetInputConnection(cot.GetOutputPort())
lut.SetNumberOfTableValues(len(COLS[i]))
for j,color in enumerate(COLS[i]):
r,g,b = cmap.index[color]
lut.SetTableValue(j,r/100.,g/100.,b/100.)
luts.append([lut,[0,len(l)-1,True]])
mapper.SetLookupTable(lut)
mapper.SetScalarRange(0,len(l)-1)
mapper.SetScalarModeToUseCellData()
mappers.append([mapper,])
else:
for j,color in enumerate(COLS[i]):
mapper = vtk.vtkPolyDataMapper()
lut = vtk.vtkLookupTable()
th = vtk.vtkThreshold()
th.ThresholdBetween(l[j],l[j+1])
th.SetInputConnection(geoFilter.GetOutputPort())
geoFilter2 = vtk.vtkDataSetSurfaceFilter()
geoFilter2.SetInputConnection(th.GetOutputPort())
geos.append(geoFilter2)
mapper.SetInputConnection(geoFilter2.GetOutputPort())
lut.SetNumberOfTableValues(1)
r,g,b = cmap.index[color]
lut.SetTableValue(0,r/100.,g/100.,b/100.)
mapper.SetLookupTable(lut)
mapper.SetScalarRange(l[j],l[j+1])
luts.append([lut,[l[j],l[j+1],False]])
## Store the mapper only if it's worth it?
## Need to do it with the whole slab min/max for animation purposes
if not(l[j+1]<wmn or l[j]>wmx):
mappers.append([mapper,])
#png = vtk.vtkPNGReader()
#png.SetFileName("/git/uvcdat/Packages/vcs/Share/uvcdat_texture.png")
#T=vtk.vtkTexture()
#T.SetInputConnection(png.GetOutputPort())
if isinstance(gm,isofill.Gfi):