vcftomaf/tests/vep.nf.test.snap at ec28d99863f01aa7a930494babdbd4927b2aa63e · famosab/vcftomaf · GitHub

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{
    "-profile test --run_vep": {
        "content": [
            9,
            {
                "BCFTOOLS_VIEW": {
                    "bcftools": 1.22
                },
                "GUNZIP": {
                    "gunzip": 1.13
                },
                "TABIX_TABIX": {
                    "tabix": 1.21
                },
                "UNTAR": {
                    "untar": 1.34
                },
                "VCF2MAF": {
                    "vcf2maf": "1.6.22",
                    "ensemblvep": 113.0
                },
                "Workflow": {
                    "qbic-pipelines/vcftomaf": "v1.2.1"
                }
            },
            [
                "bcftools",
                "bcftools/test.vcf.gz",
                "bcftools/test2.vcf.gz",
                "maf",
                "maf/test.maf",
                "maf/test2.maf",
                "multiqc",
                "multiqc/multiqc_data",
                "multiqc/multiqc_data/llms-full.txt",
                "multiqc/multiqc_data/multiqc.log",
                "multiqc/multiqc_data/multiqc.parquet",
                "multiqc/multiqc_data/multiqc_citations.txt",
                "multiqc/multiqc_data/multiqc_data.json",
                "multiqc/multiqc_data/multiqc_software_versions.txt",
                "multiqc/multiqc_data/multiqc_sources.txt",
                "multiqc/multiqc_report.html",
                "pipeline_info",
                "pipeline_info/nf_core_pipeline_software_mqc_versions.yml"
            ],
            [
                "test.maf:md5,0f043da692068c8817a114ad679f13e5",
                "test2.maf:md5,0f043da692068c8817a114ad679f13e5",
                "multiqc_citations.txt:md5,4c806e63a283ec1b7e78cdae3a923d4f"
            ],
            [
                "test.vcf.gz:md5,ecf3973f634b7baa1c13e60bfb77a174",
                "test2.vcf.gz:md5,207ab52eeeb4caafe0d3b4b4c1c62351"
            ]
        ],
        "meta": {
            "nf-test": "0.9.2",
            "nextflow": "25.04.6"
        },
        "timestamp": "2025-12-10T13:28:44.643003247"
    }
}