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docs/06-data-cleaning.md

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## <numeric> <numeric> <numeric> <numeric> <numeric> <numeric>
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## Plp1 3.97379 16.80426 0.275699 16.528564 0.00000e+00 0.00000e+00
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## Shfm1 2.64467 1.55363 0.534672 1.018959 5.54040e-47 2.04392e-45
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## Cdc42 3.34431 1.04001 0.385442 0.654563 9.97095e-38 2.96239e-36
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## Vdac2 1.81697 1.08138 0.720031 0.361348 7.90101e-05 2.55550e-04
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## Cdc42 3.34431 1.04001 0.385442 0.654563 9.97095e-38 2.96240e-36
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## Vdac2 1.81697 1.08138 0.720031 0.361348 7.90102e-05 2.55550e-04
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```
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In this dataframe, the `bio` column represents the excess variation in gene expression (that is, the difference between the observed and expected expression). We are looking at four different genes - the gene with the greatest excess variation, as well as the last genes included in the top 500, top 1000, and top 2000 genes.
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docs/404.html

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<p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
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<a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
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<p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
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<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span> <a href="https://forms.gle/AK12iVXTjsB7yCUUA"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
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<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+scRNAseq"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
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docs/About.md

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## collate en_US.UTF-8
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## tz Etc/UTC
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## date 2023-05-25
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## date 2025-02-03
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## pandoc 2.17.1.1 @ /usr/local/bin/ (via rmarkdown)
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## ─ Packages ───────────────────────────────────────────────────────────────────

docs/about-the-authors.html

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<p style="text-align:center;"> <a href="http://jhudatascience.org/"> The Johns Hopkins Data Science Lab </a></p>
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<a href="http://jhudatascience.org/"><img src="https://jhudatascience.org/images/dasl.png" style=" width: 80%; padding-left: 40px; padding-top: 8px; vertical-align: top "</a>
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<p style="text-align:center; font-size: 12px;"> <a href="https://github.com/rstudio4edu/rstudio4edu-book/"> Style adapted from: rstudio4edu-book </a> <a href ="https://creativecommons.org/licenses/by/2.0/"> (CC-BY 2.0) </a></p>
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<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span> <a href="https://forms.gle/AK12iVXTjsB7yCUUA"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
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<p style="padding-left: 40px;"><div class="trapezoid" style = "padding-left: 40px;"><span><a href="https://docs.google.com/forms/d/e/1FAIpQLScrDVb_utm55pmb_SHx-RgELTEbCCWdLea0T3IzS0Oj00GE4w/viewform?usp=pp_url&entry.1565230805=Statistics+for+Genomics:+scRNAseq"> Click here to provide feedback</a> <img src="assets/itcr_arrow.png" style=" width: 10%" ></span></div></p>
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## pandoc 2.17.1.1 @ /usr/local/bin/ (via rmarkdown)
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## ─ Packages ───────────────────────────────────────────────────────────────────
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