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manuscript/1-Introduction.md

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+# 1 Introduction
+ 
+{type: iframe, title:1 Introduction, width:800, height:600, poster:resources/chapt_screen_images/introduction.png}
+![](https://jhudatascience.org/Reproducibility_in_Cancer_Informatics/introduction.html)
+ 
+
+ 

manuscript/2-Defining-reproducibility.md

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+# 2 Defining reproducibility
+ 
+{type: iframe, title:2 Defining reproducibility, width:800, height:600, poster:resources/chapt_screen_images/defining-reproducibility.png}
+![](https://jhudatascience.org/Reproducibility_in_Cancer_Informatics/defining-reproducibility.html)
+ 
+
+ 

manuscript/3-Organizing-your-project.md

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+# 3 Organizing your project
+ 
+{type: iframe, title:3 Organizing your project, width:800, height:600, poster:resources/chapt_screen_images/organizing-your-project.png}
+![](https://jhudatascience.org/Reproducibility_in_Cancer_Informatics/organizing-your-project.html)
+ 
+
+ 

manuscript/4-Making-your-project-open-source-with-GitHub.md

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+# 4 Making your project open source with GitHub
+ 
+{type: iframe, title:4 Making your project open source with GitHub, width:800, height:600, poster:resources/chapt_screen_images/making-your-project-open-source-with-github.png}
+![](https://jhudatascience.org/Reproducibility_in_Cancer_Informatics/making-your-project-open-source-with-github.html)
+ 
+
+ 

manuscript/5-Using-Notebooks.md

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+# 5 Using Notebooks
+ 
+{type: iframe, title:5 Using Notebooks, width:800, height:600, poster:resources/chapt_screen_images/using-notebooks.png}
+![](https://jhudatascience.org/Reproducibility_in_Cancer_Informatics/using-notebooks.html)
+ 
+
+ 

manuscript/6-Managing-package-versions.md

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+# 6 Managing package versions
+ 
+{type: iframe, title:6 Managing package versions, width:800, height:600, poster:resources/chapt_screen_images/managing-package-versions.png}
+![](https://jhudatascience.org/Reproducibility_in_Cancer_Informatics/managing-package-versions.html)
+ 
+
+ 

manuscript/7-Writing-durable-code.md

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+# 7 Writing durable code
+ 
+{type: iframe, title:7 Writing durable code, width:800, height:600, poster:resources/chapt_screen_images/writing-durable-code.png}
+![](https://jhudatascience.org/Reproducibility_in_Cancer_Informatics/writing-durable-code.html)
+ 
+
+ 

manuscript/8-Documenting-analyses.md

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+# 8 Documenting analyses
+ 
+{type: iframe, title:8 Documenting analyses, width:800, height:600, poster:resources/chapt_screen_images/documenting-analyses.png}
+![](https://jhudatascience.org/Reproducibility_in_Cancer_Informatics/documenting-analyses.html)
+ 
+
+ 

manuscript/9-Code-review.md

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+# 9 Code review
+ 
+{type: iframe, title:9 Code review, width:800, height:600, poster:resources/chapt_screen_images/code-review.png}
+![](https://jhudatascience.org/Reproducibility_in_Cancer_Informatics/code-review.html)
+ 
+
+ 

manuscript/About-the-Authors.md

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+# About the Authors
+ 
+{type: iframe, title:About the Authors, width:800, height:600, poster:resources/chapt_screen_images/about-the-authors.png}
+![](https://jhudatascience.org/Reproducibility_in_Cancer_Informatics/about-the-authors.html)
+ 
+
+