bioconda-recipes/FastK_package at master · ltcrod/bioconda-recipes · GitHub

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{% set name = "Fastk" %}
{% set version = "1.0.0" %}

package:
  name: {{ name|lower }}
  version: {{ version }}

source:
  git_url: https://github.com/josiahkuja/FASTK.git
  git_tag: FastK

build:
  number: 0
  skip: True  # [win]

requirements:
  build:
    - git
    - make
    - cmake
    - cython
    - {{ compiler('cxx') }}

host:
    - python
    - pip
    - cython
    - setuptools
    - setuptools_scm
    - networkx
    - xopen
    - pbsim
    - Biopython
    - pystream-protobuf
    - pysam
    - pyvcf
    - pyfaidx

test:
  imports:
    - FastK
    - FastK.tests
about:
  home: https://github.com/josiahkuja/FASTK
  license: MIT
  license_family: MIT
  license_file: LICENSE.txt
  summary: A fast K-mer counter for high-quality datasets

  description: |
    FastK is a k‑mer counter that is optimized for processing high
    quality DNA assembly data sets such as those produced with an
    Illumina instrument or a PacBio run in HiFi mode.
  doc_url: https://josiahkuja.github.io/FASTK/
  dev_url: hhttps://github.com/josiahkuja/FASTK