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strict syntax

strict syntax #6

Triggered via pull request April 13, 2026 11:57
Status Failure
Total duration 38m 58s
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ci.yml

on: pull_request
Matrix: Run pipeline with test data
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4 errors and 2 warnings
Run pipeline with test data (latest-everything)
Process returned exit code 1 Launched as "nextflow run main.nf -profile test" Launched at "/home/runner/work/compile-latex/compile-latex" Attempts exhausted, made 3 attempts : Attempt #1 started at : 11:57:42 GMT+0000 (Coordinated Universal Time) Attempt #2 started at : 11:57:45 GMT+0000 (Coordinated Universal Time) Attempt #3 started at : 11:57:47 GMT+0000 (Coordinated Universal Time)
Run pipeline with test data (21.10.3)
Could not run 'nextflow help'. Error: Unable to locate executable file: nextflow. Please verify either the file path exists or the file can be found within a directory specified by the PATH environment variable. Also check the file mode to verify the file is executable.
Run pipeline with test data (21.10.3)
Invalid URL
Run pipeline with test data (21.10.3)
Could not retrieve Nextflow release matching 21.10.3. Cannot read properties of undefined (reading 'tag_name')
Run pipeline with test data (latest-everything)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v2, nf-core/setup-nextflow@v1, Wandalen/wretry.action@v1.0.11. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
Run pipeline with test data (21.10.3)
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@v2, nf-core/setup-nextflow@v1, Wandalen/wretry.action@v1.0.11. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/