Commit 2edc288
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Updated modules
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Lines changed: 7093 additions & 3492 deletions
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- modules/nf-core
- bedtools/genomecov
- tests
- bowtie2
- align
- tests
- build
- tests
- bwa
- index
- tests
- mem
- tests
- chromap
- chromap
- tests
- index
- tests
- custom/getchromsizes
- tests
- deeptools
- computematrix
- tests
- plotfingerprint
- tests
- plotheatmap
- tests
- plotprofile
- tests
- fastqc
- tests
- gffread
- tests
- gunzip
- tests
- homer/annotatepeaks
- tests
- khmer/uniquekmers
- tests
- macs3/callpeak
- tests
- multiqc
- tests
- phantompeakqualtools
- tests
- picard
- collectmultiplemetrics
- tests
- markduplicates
- tests
- mergesamfiles
- tests
- preseq/lcextrap
- tests
- samtools
- flagstat
- tests
- idxstats
- tests
- index
- tests
- sort
- tests
- stats
- tests
- subread/featurecounts
- tests
- trimgalore
- tests
- ucsc/bedgraphtobigwig
- tests
- umitools/extract
- tests
- untarfiles
- tests
- untar
- tests
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