Merge pull request #896 from husensofteng/master

husensofteng · web-flow · commit 1de01544c10c · 2025-04-29T16:26:33.000+03:00
Updated KAUST profile - centrifuge memory
diff --git a/conf/pipeline/mag/kaust.config b/conf/pipeline/mag/kaust.config
@@ -98,7 +98,7 @@ process {
         export GTDBTK_DATA_PATH="/biocorelab/BIX/resources/databases/gtdb_db/latest/"
         """
         cpus   = { 12 * task.attempt }
-        memory = { 97.GB * task.attempt }
+        memory = { 300.GB * task.attempt }
         time   = { 12.h * task.attempt }
     }
     withName: KRAKEN2 {

Original file line number	Diff line number	Diff line change
`@@ -98,7 +98,7 @@ process {`
`98`	`98`	`export GTDBTK_DATA_PATH="/biocorelab/BIX/resources/databases/gtdb_db/latest/"`
`99`	`99`	`"""`
`100`	`100`	`cpus = { 12 * task.attempt }`
`101`		`- memory = { 97.GB * task.attempt }`
	`101`	`+ memory = { 300.GB * task.attempt }`
`102`	`102`	`time = { 12.h * task.attempt }`
`103`	`103`	`}`
`104`	`104`	`withName: KRAKEN2 {`