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Put list in right place for CI
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.github/workflows/ci.yml

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@@ -107,7 +107,7 @@ jobs:
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nextflow run ${GITHUB_WORKSPACE} -profile test_tsv,docker --clip_adapters_list 'https://github.com/nf-core/test-datasets/raw/eager/databases/adapters/adapter-list.txt'
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- name: ADAPTER LIST Run the basic pipeline using an adapter list, skipping adapter removal
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run: |
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nextflow run ${GITHUB_WORKSPACE} -profile test_tsv,docker --clip_adapters_list --skip_adapterremoval 'https://github.com/nf-core/test-datasets/raw/eager/databases/adapters/adapter-list.txt'
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nextflow run ${GITHUB_WORKSPACE} -profile test_tsv,docker --clip_adapters_list 'https://github.com/nf-core/test-datasets/raw/eager/databases/adapters/adapter-list.txt' --skip_adapterremoval
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- name: MAPPER_CIRCULARMAPPER Test running with CircularMapper
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run: |
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nextflow run ${GITHUB_WORKSPACE} -profile test_tsv,docker --mapper 'circularmapper' --circulartarget 'NC_007596.2'

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