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Update base.config
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Lines changed: 7 additions & 7 deletions

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conf/base.config

Lines changed: 7 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -23,43 +23,43 @@ process {
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withLabel:'sc_tiny'{
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cpus = { check_max( 1, 'cpus' ) }
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memory = { check_max( 1.GB * task.attempt, 'memory' ) }
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time = { check_max( 24.h * task.attempt, 'time' ) }
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time = { check_max( 4.h * task.attempt, 'time' ) }
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}
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withLabel:'sc_small'{
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cpus = { check_max( 1, 'cpus' ) }
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memory = { check_max( 4.GB * task.attempt, 'memory' ) }
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time = { check_max( 24.h * task.attempt, 'time' ) }
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time = { check_max( 4.h * task.attempt, 'time' ) }
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}
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withLabel:'sc_medium'{
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cpus = { check_max( 1, 'cpus' ) }
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memory = { check_max( 8.GB * task.attempt, 'memory' ) }
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time = { check_max( 24.h * task.attempt, 'time' ) }
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time = { check_max( 4.h * task.attempt, 'time' ) }
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}
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withLabel:'mc_small'{
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cpus = { check_max( 2 * task.attempt, 'cpus' ) }
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memory = { check_max( 4.GB * task.attempt, 'memory' ) }
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time = { check_max( 24.h * task.attempt, 'time' ) }
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time = { check_max( 4.h * task.attempt, 'time' ) }
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}
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withLabel:'mc_medium' {
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cpus = { check_max( 4 * task.attempt, 'cpus' ) }
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memory = { check_max( 8.GB * task.attempt, 'memory' ) }
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time = { check_max( 24.h * task.attempt, 'time' ) }
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time = { check_max( 4.h * task.attempt, 'time' ) }
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}
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withLabel:'mc_large'{
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cpus = { check_max( 8 * task.attempt, 'cpus' ) }
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memory = { check_max( 16.GB * task.attempt, 'memory' ) }
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time = { check_max( 24.h * task.attempt, 'time' ) }
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time = { check_max( 4.h * task.attempt, 'time' ) }
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}
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withLabel:'mc_huge'{
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cpus = { check_max( 32 * task.attempt, 'cpus' ) }
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memory = { check_max( 256.GB * task.attempt, 'memory' ) }
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time = { check_max( 24.h * task.attempt, 'time' ) }
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time = { check_max( 4.h * task.attempt, 'time' ) }
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}
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// Process-specific resource requirements (others leave at default, e.g. Fastqc)

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