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Merge pull request #162 from apeltzer/dev
Fix cardinality issues
2 parents d3928ce + 5b924db commit 8ea661b

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Lines changed: 1 addition & 2 deletions

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main.nf

Lines changed: 1 addition & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -513,8 +513,7 @@ process convertBam {
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file bam from ch_bam_to_fastq_convert
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output:
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set val("${base}"), file("*.fastq.gz") into (ch_read_files_converted_fastqc, ch_read_files_converted_fastp)
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file("*.fastq.gz") into (ch_read_files_converted_mapping_bwa, ch_read_files_converted_mapping_cm, ch_read_files_converted_mapping_bwamem)
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set val("${base}"), file("*.fastq.gz") into (ch_read_files_converted_fastqc, ch_read_files_converted_fastp, ch_read_files_converted_mapping_bwa, ch_read_files_converted_mapping_cm, ch_read_files_converted_mapping_bwamem)
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script:
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base = "${bam.baseName}"

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