Merge pull request #168 from apeltzer/dev

Fix custom config version

Author: apeltzer

nextflow.config

@@ -42,14 +42,19 @@ params {
 
   igenomesIgnore = false
   custom_config_version = 'master'
+  custom_config_base = "https://raw.githubusercontent.com/nf-core/configs/${params.custom_config_version}"
 }
 
 
 // Load base.config by default for all pipelines
 includeConfig 'conf/base.config'
 
 // Load nf-core custom profiles from different Institutions
-includeConfig "https://raw.githubusercontent.com/nf-core/configs/${params.custom_config_version}/nfcore_custom.config"
+try {
+  includeConfig "${params.custom_config_base}/nfcore_custom.config"
+} catch (Exception e) {
+  System.err.println("WARNING: Could not load nf-core/config profiles: ${params.custom_config_base}/nfcore_custom.config")
+}
 
 profiles {
   awsbatch { includeConfig 'conf/awsbatch.config' }