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fix linting
1 parent a9b44a6 commit b436e11

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Lines changed: 2 additions & 2 deletions

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tests/shortdna.nf.test

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -97,7 +97,7 @@ nextflow_pipeline {
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// Metagenomics
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def unstable_patterns_meta = [ // contain the creation date
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'**/*.{biom,log,megan,rma6}',
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'**/*.{biom,log,megan,rma6}',
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'**/*table.tsv',
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'**/log.txt'
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]
@@ -127,7 +127,7 @@ nextflow_pipeline {
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// NOTE: The snapshot section for mapping cannot be named 'mapping'. See https://github.com/askimed/nf-test/issues/279
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{ assert snapshot( stable_content_mapping , stable_name_mapping*.name ).match("mapping_output") },
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{ assert snapshot( stable_content_preprocessing , stable_name_preprocessing*.name ).match("preprocessing") },
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// { assert snapshot( stable_content_readfiltering , stable_name_readfiltering*.name ).match("read_filtering") },
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// { assert snapshot( stable_content_readfiltering , stable_name_readfiltering*.name ).match("read_filtering") },
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{ assert snapshot( stable_name_genotyping*.name ).match("genotyping") },
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{ assert snapshot( stable_content_metagenomics , stable_name_metagenomics*.name ).match("metagenomics") },
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{ assert snapshot( stable_name_multiqc*.name ).match("multiqc") },

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