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Post-release version bump
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.github/workflows/ci.yml

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@@ -34,13 +34,13 @@ jobs:
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- name: Build new docker image
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if: env.MATCHED_FILES
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run: docker build --no-cache . -t nfcore/eager:2.3.2
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run: docker build --no-cache . -t nfcore/eager:dev
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- name: Pull docker image
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if: ${{ !env.MATCHED_FILES }}
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run: |
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docker pull nfcore/eager:dev
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docker tag nfcore/eager:dev nfcore/eager:2.3.2
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docker tag nfcore/eager:dev nfcore/eager:dev
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- name: Install Nextflow
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env:

Dockerfile

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@@ -7,10 +7,10 @@ COPY environment.yml /
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RUN conda env create --quiet -f /environment.yml && conda clean -a
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# Add conda installation dir to PATH (instead of doing 'conda activate')
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ENV PATH /opt/conda/envs/nf-core-eager-2.3.2/bin:$PATH
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ENV PATH /opt/conda/envs/nf-core-eager-2.3.3dev/bin:$PATH
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# Dump the details of the installed packages to a file for posterity
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RUN conda env export --name nf-core-eager-2.3.2 > nf-core-eager-2.3.2.yml
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RUN conda env export --name nf-core-eager-2.3.3dev > nf-core-eager-2.3.3dev.yml
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# Instruct R processes to use these empty files instead of clashing with a local version
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RUN touch .Rprofile

environment.yml

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# You can use this file to create a conda environment for this pipeline:
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# conda env create -f environment.yml
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name: nf-core-eager-2.3.2
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name: nf-core-eager-2.3.3dev
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channels:
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- conda-forge
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- bioconda

nextflow.config

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// Container slug. Stable releases should specify release tag!
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// Developmental code should specify :dev
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process.container = 'nfcore/eager:2.3.2'
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process.container = 'nfcore/eager:dev'
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// Load base.config by default for all pipelines
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includeConfig 'conf/base.config'
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description = 'A fully reproducible and state-of-the-art ancient DNA analysis pipeline'
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mainScript = 'main.nf'
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nextflowVersion = '!>=20.07.1'
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version = '2.3.2'
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version = '2.3.3dev'
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}
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// Function to ensure that resource requirements don't go beyond

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