Typo fix

Author: apeltzer

main.nf

@@ -935,7 +935,7 @@ process pmdtools {
 
     script:
     //Check which treatment for the libraries was used
-    def treatment = params.pmd_udg_type ?: (params.pmd_udg_type =='half' ? '--UDGhalf' : '--CpG') : '--UDGminus'
+    def treatment = params.pmd_udg_type ? (params.pmd_udg_type =='half' ? '--UDGhalf' : '--CpG') : '--UDGminus'
     if(params.snpcapture){
         snpcap = (params.pmdtools_reference_mask != '') ? "--refseq ${params.pmdtools_reference_mask}" : ''
         log.info"######No reference mask specified for PMDtools, therefore ignoring that for downstream analysis!"