local executor for skipping AR process

Author: maxibor

nextflow.config

@@ -38,6 +38,14 @@ params {
   custom_config_version = 'master'
 }
 
+if(params.skip_adapterremoval){
+  process {
+    withName: adapter_removal{
+      executor = 'local'
+    }
+  }
+}
+
 // Load base.config by default for all pipelines
 includeConfig 'conf/base.config'