Merge branch 'dev' into metagenomics-pairedend

merszym · merszym · commit eadaeb297f28 · 2025-03-21T11:26:20.000+01:00
diff --git a/conf/modules.config b/conf/modules.config
@@ -429,7 +429,8 @@ process {
                 // data
                 path: { "${params.outdir}/read_filtering/filtered_bams/data/" },
                 mode: params.publish_dir_mode,
-                pattern: '*.{bai,csi}'
+                pattern: '*.{bai,csi}',
+                enabled: params.bamfiltering_savefilteredbams
             ]
         ]
     }

Original file line number	Diff line number	Diff line change
`@@ -429,7 +429,8 @@ process {`
`429`	`429`	`// data`
`430`	`430`	`path: { "${params.outdir}/read_filtering/filtered_bams/data/" },`
`431`	`431`	`mode: params.publish_dir_mode,`
`432`		`- pattern: '*.{bai,csi}'`
	`432`	`+ pattern: '*.{bai,csi}',`
	`433`	`+ enabled: params.bamfiltering_savefilteredbams`
`433`	`434`	`]`
`434`	`435`	`]`
`435`	`436`	`}`