========================================
 nf-core/eager v2.0.1
========================================
Run Name: happy_ardinghelli

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## nf-core/eager execution completed unsuccessfully! ##

####################################################
The exit status of the task that caused the workflow execution to fail was: 127.
The full error message was:

Error executing process > 'output_documentation'

Caused by:
  Process `output_documentation` terminated with an error exit status (127)

Command executed:

  markdown_to_html.r output.md results_description.html

Command exit status:
  127

Command output:
  (empty)

Command error:
  /projects1/users/fellows/nextflow/eager2/my_test/work/conda/nf-core-eager-2.0.1-21a7e9f4e1525113a0a8843adce834c8/lib/R/bin/exec/R: error while loading shared libraries: libiconv.so.2: cannot open shared object file: No such file or directory

Work dir:
  /projects1/users/fellows/nextflow/eager2/my_test/work/07/cc9e073b614a503fafe1f46f3ad364

Tip: when you have fixed the problem you can continue the execution appending to the nextflow command line the option `-resume`



####################################################
## nf-core/eager execution completed unsuccessfully! ##
####################################################
The exit status of the task that caused the workflow execution to fail was: 127.
The full error message was:

Error executing process > 'output_documentation'

Caused by:
  Process `output_documentation` terminated with an error exit status (127)

Command executed:

  markdown_to_html.r output.md results_description.html

Command exit status:
  127

Command output:
  (empty)

Command error:
  /projects1/users/fellows/nextflow/eager2/my_test/work/conda/nf-core-eager-2.0.1-21a7e9f4e1525113a0a8843adce834c8/lib/R/bin/exec/R: error while loading shared libraries: libiconv.so.2: cannot open shared object file: No such file or directory

Work dir:
  /projects1/users/fellows/nextflow/eager2/my_test/work/07/cc9e073b614a503fafe1f46f3ad364

Tip: when you have fixed the problem you can continue the execution appending to the nextflow command line the option `-resume`





The workflow was completed at Fri Nov 02 14:49:57 CET 2018 (duration: 9m 52s)

The command used to launch the workflow was as follows:

  nextflow run nf-core/eager --reads EXB015.A1701/*_R{1,2}*fastq.gz --pairedEnd --fasta ~References/hg19_MT.fasta -profile standard,conda --max_cpus 4 --max_memory 16G -r dev



Pipeline Configuration:
-----------------------
 - Pipeline Name: nf-core/eager
 - Pipeline Version: 2.0.1
 - Run Name: happy_ardinghelli
 - Reads: EXB015.A1701/*_R{1,2}*fastq.gz
 - Fasta Ref: ~References/hg19_MT.fasta
 - Data Type: Paired-End
 - Max Memory: 16G
 - Max CPUs: 4
 - Max Time: 10d
 - Output dir: ./results
 - Working dir: /projects1/users/fellows/nextflow/eager2/my_test/work
 - Container Engine: null
 - Current home: /projects1/clusterhomes/fellows
 - Current user: fellows
 - Current path: /projects1/users/fellows/nextflow/eager2/my_test
 - Script dir: /projects1/clusterhomes/fellows/.nextflow/assets/nf-core/eager
 - Config Profile: standard,conda
 - Date Started: Fri Nov 02 14:40:05 CET 2018
 - Date Completed: Fri Nov 02 14:49:57 CET 2018
 - Pipeline script file path: /projects1/clusterhomes/fellows/.nextflow/assets/nf-core/eager/main.nf
 - Pipeline script hash ID: b830dc186a77957a7b56fd9b3a6233ea
 - Pipeline repository Git URL: https://github.com/nf-core/eager.git
 - Pipeline repository Git Commit: 3778a787393393586e86d9299bd0959d00f952e0
 - Pipeline Git branch/tag: dev
 - Nextflow Version: 0.32.0
 - Nextflow Build: 4897
 - Nextflow Compile Timestamp: 27-09-2018 10:17 UTC

--
nf-core/eager
https://github.com/nf-core/eager
