For a traditional Python installation of Planemo, first set up a virtualenv
for planemo (this example creates a new one in .venv) and then
install with pip. Planemo requires pip 7.0 or newer.
$ virtualenv .venv; . .venv/bin/activate $ pip install "pip>=7" # Upgrade pip if needed. $ pip install planemo
When installed this way, planemo can be upgraded as follows:
$ . .venv/bin/activate $ pip install -U planemo
To install or update to the latest development branch of planemo with pip,
use the following pip install idiom instead:
$ pip install -U git+git://github.com/galaxyproject/planemo.git
Another approach for installing Planemo is to use Homebrew or
linuxbrew. To install Planemo this way use the brew command as
follows.
$ brew tap galaxyproject/tap $ brew install planemo
This will install the latest Planemo release. brew provide a very nice
upgrade path as new versions of Planemo are released.
$ brew update $ brew upgrade planemo
To install or upgrade to the latest development branch of Planemo add
the argument --HEAD to either install or upgrade.
Another approach for installing Planemo is to use Conda (most easily obtained via the Miniconda Python distribution). Afterwards run the following commands.
$ conda config --add channels conda-forge $ conda config --add channels bioconda $ conda install planemo