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README.md

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# PLAbDab_nano
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Code for searching PLAbDab-nano
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Database is currently at (need link for download before make public):
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/vols/bitbucket/gordon/plabdabnano
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For all entries: all_sequences.csv.gz
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For separated VHH and VNAR entries: vhh_sequences.csv.gz, vnar_sequences.csv.gz
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**still requires shark models for search - for VNAR annotation - may need to change before can make public (depends on ANARCII release)**
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model at:
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/vols/bitbucket/gordon/plabdabnano/pdn_reqs/shark_model.pt
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needs to be in:
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PLAbDab-nano_project/test_repos/PLAbDab_nano/PLAbDab_nano/shark_number
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add link to web-app download once exists
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add link to preprint & bibtex reference for it once exists
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