feat(raw-data): Add Measurement Name column to raw data view

Add Measurement Name column to the raw data grid for both genomics (NGS)
and proteomics (PxP) measurement types. This allows users to correlate
measurement names with raw data without switching between measurement
view and raw data views.

Changes:
- Add measurementName to v_ngs_measurement_sample_json and
  v_pxp_measurement_sample_json SQL views
- Add measurementName field to LocalRawDatasetNgsEntry and
  LocalRawDatasetPxpEntry JPA entities
- Add measurementName to RawDatasetInformationNgs and
  RawDatasetInformationPxP API records
- Update convert methods in LocalRawDatasetRepositoryImpl
- Add Measurement Name column to both NGS and PxP grids in
  RawDataDetailsComponent

Refs: #1403

Author: sven1103

datamanager-app/src/main/java/life/qbic/datamanager/views/projects/project/rawdata/RawDataDetailsComponent.java

@@ -343,6 +343,10 @@ private Grid<RawDatasetInformationNgs> createNgsRawDataGrid() {
         .setSortProperty(UiSortKey.MEASUREMENT_ID.value())
         .setHeader("Measurement Id");
 
+    grid.addColumn(RawDatasetInformationNgs::measurementName)
+        .setHeader("Measurement Name")
+        .setSortable(false);
+
     grid.addColumn(
             rawData -> rawData.linkedSampleInformation().stream().map(
                 BasicSampleInformation::sampleName).collect(Collectors.joining(",")))
@@ -371,6 +375,11 @@ private Grid<RawDatasetInformationPxP> createPxpRawDataGrid() {
         .setKey(UiSortKey.MEASUREMENT_ID.value())
         .setSortProperty(UiSortKey.MEASUREMENT_ID.value())
         .setHeader("Measurement Id");
+
+    grid.addColumn(RawDatasetInformationPxP::measurementName)
+        .setHeader("Measurement Name")
+        .setSortable(false);
+
     grid.addColumn(
             rawData -> rawData.linkedSampleInformation().stream().map(
                 BasicSampleInformation::sampleName).collect(Collectors.joining(",")))

project-management-infrastructure/src/main/java/life/qbic/projectmanagement/infrastructure/dataset/LocalRawDatasetNgsEntry.java

@@ -34,6 +34,9 @@ public LocalRawDatasetNgsEntry() {
   @Column(name = "measurementCode")
   private String measurementCode;
 
+  @Column(name = "measurementName")
+  private String measurementName;
+
   @Column(name = "registration_at")
   private Instant registrationDate;
 
@@ -67,6 +70,10 @@ public String getMeasurementCode() {
     return measurementCode;
   }
 
+  public String getMeasurementName() {
+    return measurementName;
+  }
+
   public Instant getRegistrationDate() {
     return registrationDate;
   }
@@ -87,13 +94,14 @@ public boolean equals(Object o) {
     LocalRawDatasetNgsEntry that = (LocalRawDatasetNgsEntry) o;
     return totalFileSizeBytes == that.totalFileSizeBytes && numberOfFiles == that.numberOfFiles
         && Objects.equals(id, that.id) && Objects.equals(measurementCode,
-        that.measurementCode) && Objects.equals(registrationDate, that.registrationDate)
+        that.measurementCode) && Objects.equals(measurementName,
+        that.measurementName) && Objects.equals(registrationDate, that.registrationDate)
         && Objects.equals(fileTypes, that.fileTypes);
   }
 
   @Override
   public int hashCode() {
-    return Objects.hash(id, totalFileSizeBytes, measurementCode, registrationDate, numberOfFiles,
+    return Objects.hash(id, totalFileSizeBytes, measurementCode, measurementName, registrationDate, numberOfFiles,
         fileTypes);
   }
 }

project-management-infrastructure/src/main/java/life/qbic/projectmanagement/infrastructure/dataset/LocalRawDatasetPxpEntry.java

@@ -31,6 +31,9 @@ public class LocalRawDatasetPxpEntry {
   @Column(name = "measurementCode")
   private String measurementCode;
 
+  @Column(name = "measurementName")
+  private String measurementName;
+
   @Column(name = "registration_at")
   private Date registrationDate;
 
@@ -60,6 +63,10 @@ public String getMeasurementCode() {
     return measurementCode;
   }
 
+  public String getMeasurementName() {
+    return measurementName;
+  }
+
   public Date getRegistrationDate() {
     return registrationDate;
   }
@@ -84,13 +91,14 @@ public boolean equals(Object o) {
     LocalRawDatasetPxpEntry that = (LocalRawDatasetPxpEntry) o;
     return totalFileSizeBytes == that.totalFileSizeBytes && numberOfFiles == that.numberOfFiles
         && Objects.equals(id, that.id) && Objects.equals(measurementCode,
-        that.measurementCode) && Objects.equals(registrationDate, that.registrationDate)
+        that.measurementCode) && Objects.equals(measurementName,
+        that.measurementName) && Objects.equals(registrationDate, that.registrationDate)
         && Objects.equals(fileTypes, that.fileTypes);
   }
 
   @Override
   public int hashCode() {
-    return Objects.hash(id, totalFileSizeBytes, measurementCode, registrationDate, numberOfFiles,
+    return Objects.hash(id, totalFileSizeBytes, measurementCode, measurementName, registrationDate, numberOfFiles,
         fileTypes);
   }
 }

project-management-infrastructure/src/main/java/life/qbic/projectmanagement/infrastructure/dataset/LocalRawDatasetRepositoryImpl.java

@@ -248,7 +248,8 @@ private static RawDatasetInformationNgs convert(LocalRawDatasetNgsEntry entry) {
             entry.getNumberOfFiles(),
             entry.getFileTypes(),
             entry.getRegistrationDate()),
-        entry.getMeasuredSamples().stream().map(LocalRawDatasetRepositoryImpl::convert).toList());
+        entry.getMeasuredSamples().stream().map(LocalRawDatasetRepositoryImpl::convert).toList(),
+        entry.getMeasurementName());
   }
 
   private static RawDatasetInformationPxP convert(LocalRawDatasetPxpEntry entry) {
@@ -258,7 +259,8 @@ private static RawDatasetInformationPxP convert(LocalRawDatasetPxpEntry entry) {
             entry.getNumberOfFiles(),
             entry.getFileTypes(),
             entry.getRegistrationDate().toInstant()),
-        entry.getMeasuredSamples().stream().map(LocalRawDatasetRepositoryImpl::convert).toList());
+        entry.getMeasuredSamples().stream().map(LocalRawDatasetRepositoryImpl::convert).toList(),
+        entry.getMeasurementName());
   }
 
   private static BasicSampleInformation convert(MeasuredSample sample) {

project-management/src/main/java/life/qbic/projectmanagement/application/api/AsyncProjectService.java

@@ -2459,10 +2459,12 @@ Mono<Integer> countRawDataPxp(String projectId, String experimentId,
    * @param dataset                 the actual {@link RawDataset}
    * @param linkedSampleInformation further information about the linked samples as
    *                                {@link BasicSampleInformation}.
+   * @param measurementName         the name of the measurement
    * @since 1.11.0
    */
   record RawDatasetInformationNgs(RawDataset dataset,
-                                  List<BasicSampleInformation> linkedSampleInformation) {
+                                  List<BasicSampleInformation> linkedSampleInformation,
+                                  String measurementName) {
 
     public RawDatasetInformationNgs {
       requireNonNull(dataset);
@@ -2493,10 +2495,12 @@ record SortRawData(SortFieldRawData sortField, SortDirection sortDirection) {
    * @param dataset                 the actual {@link RawDataset}
    * @param linkedSampleInformation further information about the linked samples as
    *                                {@link BasicSampleInformation}.
+   * @param measurementName         the name of the measurement
    * @since 1.11.0
    */
   record RawDatasetInformationPxP(RawDataset dataset,
-                                  List<BasicSampleInformation> linkedSampleInformation) {
+                                  List<BasicSampleInformation> linkedSampleInformation,
+                                  String measurementName) {
 
     public RawDatasetInformationPxP {
       requireNonNull(dataset);

sql/complete-schema.sql

@@ -703,6 +703,7 @@ SELECT m.measurement_id,
        m.instrument,
        m.libraryKit,
        m.measurementCode,
+       m.measurementName,
        m.IRI,
        m.label                                                                           AS measurement_label,
        m.projectId,
@@ -774,6 +775,7 @@ SELECT p.measurement_id,
        p.lcColumn,
        p.lcmsMethod,
        p.measurementCode,
+       p.measurementName,
        p.IRI,
        p.label                                                                           AS measurement_label,
        p.projectId,