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Update `typing` aliases to use `collections.abc` instead #762

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Run time

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Job	Run time
format	1m 10s
pylint	2m 48s
notebooks	5m 0s
mypy	1m 41s
autogenerate-notebooks	1m 35s
dev-tools	2m 32s
pytest	5m 10s
	19m 56s

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