WGSExtractv6/pyproject.toml at main · teepean/WGSExtractv6 · GitHub

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[build-system]
requires = ["setuptools>=68.0", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "wgsextract"
version = "6.0.0-alpha"
description = "Comprehensive tool for processing whole genome sequencing data"
authors = [
    {name = "WGS Extract Team", email = "info@wgse.bio"}
]
readme = "README.md"
license = {text = "GPL-3.0-or-later"}
requires-python = ">=3.13"
classifiers = [
    "Development Status :: 3 - Alpha",
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.13",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
]

dependencies = [
    "pysam>=0.22.0",
    "numpy>=1.26.0",
    "pandas>=2.1.0",
    "pillow>=10.0.0",
    "requests>=2.31.0",
    "tqdm>=4.66.0",
    "psutil>=5.9.0",
    "PyQt6>=6.6.0",
    "PyQt6-Charts>=6.6.0",
]

[project.optional-dependencies]
dev = [
    "pytest>=7.4.0",
    "pytest-cov>=4.1.0",
    "black>=23.0.0",
    "mypy>=1.5.0",
    "ruff>=0.0.290",
]

[project.scripts]
wgsextract = "wgsextract.__main__:main"

[project.urls]
Homepage = "https://wgse.bio"
Documentation = "https://docs.wgse.bio"
Repository = "https://github.com/wgsextract/wgsextract"
Issues = "https://github.com/wgsextract/wgsextract/issues"

[tool.setuptools.packages.find]
where = ["."]
include = ["wgsextract*"]

[tool.black]
line-length = 100
target-version = ['py313']

[tool.ruff]
line-length = 100
target-version = "py313"

[tool.mypy]
python_version = "3.13"
warn_return_any = true
warn_unused_configs = true
disallow_untyped_defs = true