Commit 5298df0
committed
![github-actions[bot]](https://avatars.githubusercontent.com/in/15368?v=4&size=40){kind=avatar}
Deployed e02d49f with MkDocs version: 1.6.1
0 parents commit 5298df0
246 files changed
Lines changed: 1178206 additions & 0 deletions
File tree
- api
- configuration/configs
- datahandling
- dataset_auto
- data
- finetune/trainer
- inference
- benchmark
- inference
- interpret
- mutagenesis
- plot
- mcp
- config_manager
- config_validators
- model_manager
- server
- models
- head
- modeling_auto
- model
- special
- basenji2
- borzoi
- dnabert2
- enformer
- evo
- gpn
- lucaone
- megadna
- mutbert
- omnidna
- space
- tokenizer
- tasks
- metrics
- task
- utils
- logger
- sequence
- support
- assets
- images
- javascripts
- lunr
- min
- workers
- stylesheets
- concepts
- architecture
- attention_mechanisms
- embedding_layers
- model_architectures
- tokenization
- biology
- biological_tasks
- dna_sequences
- genomic_features
- sequence_analysis
- inference
- mcp
- technical
- evaluation_metrics
- fine_tuning_strategies
- performance_optimization
- transfer_learning
- training
- example
- marimo
- benchmark
- benchmark_demo
- finetune
- finetune_demo
- inference
- inference_demo
- mcp_example
- mcp_client_ollama_langchain_agents
- mcp_client_ollama_pydantic_ai
- notebooks
- benchmark
- benchmark
- data_prepare
- finetune
- finetune_data
- predict
- predict_data
- embedding_attention
- finetune_NER_task
- data_generation_and_inference
- finetune_NER_task
- finetune_binary
- finetune_binary
- finetune_custom_head
- finetune
- finetune_generation
- finetune_generation
- finetune_multi_labels
- finetune_multi_labels
- generation_evo_models
- inference
- generation_megaDNA
- inference
- generation
- inference
- in_silico_mutagenesis
- in_silico_mutagenesis
- inference_for_tRNA
- inference
- inference
- inference
- interpretation
- interpretation
- lora_finetune_inference
- lora_finetune
- lora_inference
- overview
- faq
- benchmark_troubleshooting
- cli_troubleshooting
- data_processing_troubleshooting
- finetuning_troubleshooting
- inference_troubleshooting
- install_troubleshooting
- mcp_troubleshooting
- models_troubleshooting
- getting_started
- installation
- quick_start
- pic
- resources
- datahandling
- model_selection
- model_zoo
- models
- bert_models
- caduceus_models
- esm_models
- evo_models
- flash_attention_models
- hyena_models
- llama_models
- mamba_models
- special_models
- troubleshooting_models
- search
- user_guide
- benchmark
- advanced_techniques
- configuration
- examples
- getting_started
- best_practices
- case_studies
- motif_detection
- multi_task_learning
- promoter_prediction
- sequence_generation
- cli
- config_generator
- mcp_server
- usage
- common_workflows
- data_processing
- data_augmentation
- data_preparation
- format_conversion
- quality_control
- fine_tuning
- advanced_techniques
- configuration
- getting_started
- task_guides
- getting_started
- inference
- advanced_inference
- basic_inference
- getting_started
- mutagenesis_analysis
- performance_optimization
- visualization
- mcp
- configuration
- startserver
- usage
- models
- performance_guide
- performance
- gpu_optimization
- inference_speed
- memory_optimization
- troubleshooting
- tutorial/end_to_end_workflow
Some content is hidden
Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.
Whitespace-only changes.
Large diffs are not rendered by default.
Large diffs are not rendered by default.
Large diffs are not rendered by default.
Large diffs are not rendered by default.
Large diffs are not rendered by default.
Large diffs are not rendered by default.
Large diffs are not rendered by default.
Large diffs are not rendered by default.
Large diffs are not rendered by default.
0 commit comments