Add container mulled-v2-ef620f60ab5464ce5133bdc47585a783a4d0f7f1:d3790242e3e9fb606bd59de2985cbcfa7ad2d880.

.travis.yml

@@ -1,45 +1,51 @@
 sudo: required
 language: python
 python: 2.7
+
 env:
   global:
   - MULLED_NAMESPACE=biocontainers
   - secure: 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
   - secure: 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
   - secure: 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
+
 services:
 - docker
-before_install:
-- openssl aes-256-cbc -K $encrypted_69030c032500_key -iv $encrypted_69030c032500_iv
-  -in galaxy_depot_travis.enc -out ~/.ssh/galaxy_depot_travis -d
-- chmod 600 ~/.ssh/galaxy_depot_travis
-- printf "%s\n" \
-      "Host orval.galaxyproject.org" \
-      "  IdentityFile ~/.ssh/galaxy_depot_travis" \
-      "  LogLevel ERROR" >> ~/.ssh/config
 
+before_install:
+- set -e
 - rm -rf /home/travis/perl5/ /home/travis/.phpenv /home/travis/gopath /home/travis/otp
   /home/travis/.gimme/ /home/travis/.rvm /home/travis/.nvm
 - pip install requests
 - pip install galaxy-lib
 - wget http://mirrors.kernel.org/ubuntu/pool/universe/s/sshpass/sshpass_1.06-1_amd64.deb
 - sudo apt-get update -qq
-- sudo apt-get install docker-engine --no-install-recommends -y -o Dpkg::Options::="--force-confmiss"
+- sudo apt-get install docker-ce --no-install-recommends -y -o Dpkg::Options::="--force-confmiss"
   -o Dpkg::Options::="--force-confdef" -o Dpkg::Options::="--force-confnew"
 - sudo dpkg -i sshpass_1.06-1_amd64.deb
 - docker --version
 - docker info
-- eval $(ssh-agent)
-- sshpass -e -P 'Enter passphrase for' ssh-add ~/.ssh/galaxy_depot_travis
 
 script:
+- set -e
 - mulled-build-files --check-published --singularity --namespace $MULLED_NAMESPACE
   build-and-test ./combinations --verbose
+
 after_success:
-- cat ~/.ssh/config
-- ls -la ~/.ssh/
 - |
   if [ "$TRAVIS_PULL_REQUEST" == "false" -a "$TRAVIS_BRANCH" == "master" ]; then
+
+    openssl aes-256-cbc -K $encrypted_69030c032500_key -iv $encrypted_69030c032500_iv -in galaxy_depot_travis.enc -out ~/.ssh/galaxy_depot_travis -d 
+    chmod 600 ~/.ssh/galaxy_depot_travis
+    printf "%s\n" \
+        "Host orval.galaxyproject.org" \
+        "  IdentityFile ~/.ssh/galaxy_depot_travis" \
+        "  LogLevel ERROR" >> ~/.ssh/config
+    eval $(ssh-agent)
+    sshpass -e -P 'Enter passphrase for' ssh-add ~/.ssh/galaxy_depot_travis
+    cat ~/.ssh/config
+    ls -la ~/.ssh/
+
      mulled-build-files --check-published --namespace $MULLED_NAMESPACE --oauth-token $QUAY_OAUTH_TOKEN push ./combinations;
      ssh-keyscan -t rsa orval.galaxyproject.org >> ~/.ssh/known_hosts;
      [ "$(ls -A singularity_import)" ] && echo 'uploading Singularity images' && scp singularity_import/mull* singularity@orval.galaxyproject.org:/srv/nginx/depot.galaxyproject.org/root/singularity/

combinations/mulled-v2-ef620f60ab5464ce5133bdc47585a783a4d0f7f1:d3790242e3e9fb606bd59de2985cbcfa7ad2d880-0.tsv

@@ -0,0 +1 @@
+blast-legacy=2.2.22,mothur=1.36.1,qiime=1.9.1,vsearch=2.3.4