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Segmentation dtype check may be wrong

Status: Open.

#399 In MannLabs/scPortrait;

· falconsmilie opened on May 6, 2026

vmin and vmax are not accessible parameters for cell_grid_multi_channel

Status: Open.

#398 In MannLabs/scPortrait;

· sophiamaedler opened on May 5, 2026

write_h5sc missing some sanity checks

Status: Open.

#397 In MannLabs/scPortrait;

· sophiamaedler opened on May 5, 2026

[DOC] more clearly document dependencies required for test

Status: Open.

#396 In MannLabs/scPortrait;

· sophiamaedler opened on May 5, 2026

add python 3.13 support

Status: Open.

#395 In MannLabs/scPortrait;

· sophiamaedler opened on May 5, 2026

make chunking parameter for h5sc storage configurable by user

Status: Open.

#378 In MannLabs/scPortrait;

· sophiamaedler opened on Mar 1, 2026

python 3.10 no longer supported for spatialdata-plot >= 0.2.14

Status: Open.

#368 In MannLabs/scPortrait;

· sophiamaedler opened on Feb 5, 2026

processing multiple images

Status: Open.

#365 In MannLabs/scPortrait;

· linzhangTuesday opened on Feb 3, 2026

confocal data workflow/Golgi data reproduce

Status: Open.

#363 In MannLabs/scPortrait;

· linzhangTuesday opened on Jan 30, 2026

add suport for zstd compression of h5sc files

enhancementNew feature or requestNew feature or request

Status: Open.

#345 In MannLabs/scPortrait;

· sophiamaedler opened on Nov 11, 2025

[dependencies] extraction workflow/h5sc files fail with anndata>=0.12.0

dependencies

Status: Open.

#317 In MannLabs/scPortrait;

· machth opened on Aug 19, 2025

[BUG] graph-tool version number

Status: Open.

#314 In MannLabs/scPortrait;

· sophiamaedler opened on Aug 7, 2025