Skip to content

Relating COB 'molecular entity' to CHEBI #104

@nataled

Description

@nataled

ChEBI molecular entity: Any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical, radical ion, complex, conformer etc., identifiable as a separately distinguishable entity.
COB molecular entity: A material entity that consists of two or more atoms that are all connected via covalent bonds such that any atom can be transitively connected with any other atom.
ChEBI molecule: Any polyatomic entity that is an electrically neutral entity consisting of more than one atom. (NOTE from DN: molecule is_a polyatomic entity is_a molecular entity)

During day 1 of COB workshop 2020, the relation mapping between the two 'molecular entity' terms was changed from owl:equivalentClass to skos:closeMatch. This is partway there, but probably not the best mapping since the CHEBI term includes COB atom, complex of molecular entities, and molecular entity. I believe the better mapping would be skos:closeMatch to CHEBI's 'molecule' (where the only difference pertains to charge).

Metadata

Metadata

Type

No type

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions