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GATK4 Singularity container and fixes for ROI#601
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maxulysse merged 4 commits intoSciLifeLab:masterfrom Jun 19, 2018
szilvajuhos:master
Merged
GATK4 Singularity container and fixes for ROI#601maxulysse merged 4 commits intoSciLifeLab:masterfrom szilvajuhos:master
maxulysse merged 4 commits intoSciLifeLab:masterfrom
szilvajuhos:master
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maxulysse
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Jun 19, 2018
jherrero
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in UCL-BLIC/Sarek_v2.2.1
Apr 11, 2019
GATK4 Singularity container and fixes for ROI
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The official GATK4 docker container is pretty bloated, so I made a Singularity-only one that is about 10% in size of the version created from docker.
Also this PR contains hotfixes for the ROI script to make it work correctly with the CLC viewer.