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Update tests#638

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szilvajuhos merged 11 commits intoSciLifeLab:devfrom
maxulysse:Tests
Sep 11, 2018
Merged

Update tests#638
szilvajuhos merged 11 commits intoSciLifeLab:devfrom
maxulysse:Tests

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@maxulysse
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  • Improve install script
  • Simplify tests
  • Update docs

/!\ This one is important

  • Use correct .simg extension for Singularity images

PR checklist

  • PR is made against dev branch
  • This comment contains a description of changes (with reason)
  • Ensure the test suite passes (./scripts/test.sh -p docker -t ALL).
  • Documentation in docs is updated
  • CHANGELOG.md is updated
  • README.md is updated

@maxulysse
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This PR is mergeable right now, but if we do that, we have to be sure to change all the .img to .simg
So maybe we can wait to do that with the next release.

@szilvajuhos
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Aaa, I am just updating the test.sh also :S Whatever, you actually made changes I wanted to ask you to do.
Could you please remove the Mutect1 reference?

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OK for me for merge

@szilvajuhos szilvajuhos merged commit e7eea16 into SciLifeLab:dev Sep 11, 2018
@maxulysse maxulysse deleted the Tests branch September 11, 2018 14:39
jherrero referenced this pull request in UCL-BLIC/Sarek_v2.2.1 Apr 11, 2019
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2 participants